Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC-0.01□□□□□ -2.41
USH2AO75445 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC-0.01□□□□□ -2.41
USH2AO75445 AC105914.1-201ENST00000511798 226 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 SCARNA17-201ENST00000516183 144 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC-0.01□□□□□ -2.41
USH2AO75445 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.01□□□□□ -2.41
USH2AO75445 AC021739.1-201ENST00000559631 174 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 AC008498.1-201ENST00000613012 531 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC-0.01□□□□□ -2.41
USH2AO75445 SNORA1.1-201ENST00000364671 133 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 RPS3AP24-201ENST00000407896 734 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.01□□□□□ -2.41
USH2AO75445 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.01□□□□□ -2.41
USH2AO75445 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
USH2AO75445 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.01□□□□□ -2.41
USH2AO75445 AC114981.1-201ENST00000503897 678 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 SNORA40.12-201ENST00000516329 111 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC-0.01□□□□□ -2.41
USH2AO75445 AC118273.2-201ENST00000532092 465 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 AL359212.1-201ENST00000556608 614 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC-0.01□□□□□ -2.41
USH2AO75445 MIR5093-201ENST00000583199 100 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 AC004009.2-201ENST00000623016 728 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 RNU6-1197P-201ENST00000391183 107 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 RN7SKP266-201ENST00000410232 287 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC-0.02□□□□□ -2.41
USH2AO75445 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.02□□□□□ -2.41
USH2AO75445 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.02□□□□□ -2.41
USH2AO75445 COX6CP3-201ENST00000580869 223 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AL513534.2-201ENST00000603836 250 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AP001596.2-201ENST00000608410 312 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AC020923.1-201ENST00000624021 917 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AC099654.5-201ENST00000636479 350 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 MIR520F-201ENST00000384824 87 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 MIR196A2-201ENST00000385189 110 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AL079343.1-201ENST00000572358 1771 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.02□□□□□ -2.41
USH2AO75445 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC-0.02□□□□□ -2.41
USH2AO75445 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.02□□□□□ -2.41
USH2AO75445 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.02□□□□□ -2.41
USH2AO75445 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC-0.02□□□□□ -2.41
USH2AO75445 AC092757.1-201ENST00000467293 467 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AC005668.1-201ENST00000571142 476 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC-0.02□□□□□ -2.41
USH2AO75445 AC090517.2-201ENST00000614966 680 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 RNA5SP109-201ENST00000391010 116 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 DHFRP6-201ENST00000401776 268 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC-0.02□□□□□ -2.41
USH2AO75445 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.02□□□□□ -2.41
USH2AO75445 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC-0.02□□□□□ -2.41
USH2AO75445 AC114811.1-201ENST00000507207 168 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.02□□□□□ -2.41
USH2AO75445 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
USH2AO75445 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC-0.02□□□□□ -2.41
USH2AO75445 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC-0.02□□□□□ -2.41
USH2AO75445 AC090888.1-201ENST00000561335 1141 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.02□□□□□ -2.41
USH2AO75445 OR1M4P-201ENST00000589199 287 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 AC040174.2-201ENST00000602701 465 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 MIR6076-201ENST00000617521 113 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 SDAD1P2-201ENST00000441308 2028 ntBASIC-0.02□□□□□ -2.41
USH2AO75445 Y_RNA.67-201ENST00000362870 100 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 RNU1-124P-201ENST00000363861 145 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 RNU4-84P-201ENST00000364200 139 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC-0.03□□□□□ -2.41
USH2AO75445 RNY4P36-201ENST00000391116 96 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
USH2AO75445 USP9YP26-201ENST00000421008 661 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC-0.03□□□□□ -2.41
USH2AO75445 USP9YP17-201ENST00000444617 696 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 RNU1-131P-201ENST00000458943 161 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 snoU13.25-201ENST00000458945 104 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 AC145146.1-201ENST00000496370 254 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 OR6C73P-201ENST00000546432 358 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 AC104465.1-201ENST00000611365 139 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 SNORA68.1-201ENST00000364537 132 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 MIR106A-201ENST00000384870 81 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 SNORD75.1-201ENST00000408373 60 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 HMGN2P34-201ENST00000437647 269 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 NCOR1P1-202ENST00000486162 291 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 HMGB1P38-201ENST00000490557 577 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 AC002350.1-201ENST00000490759 375 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 MTCYBP41-201ENST00000528913 1123 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 AL136520.1-202ENST00000555494 763 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 AC091912.2-201ENST00000624798 167 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 OR5AK4P-201ENST00000635912 903 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 AC010329.5-201ENST00000623497 2174 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
USH2AO75445 RNU6-339P-201ENST00000384310 107 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC-0.03□□□□□ -2.41
USH2AO75445 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms