Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNU6-173P-201ENST00000364215 104 ntBASIC5.31□□□□□ -1.56
RNF40O75150 RNU1-140P-201ENST00000365040 165 ntBASIC5.31□□□□□ -1.56
RNF40O75150 Y_RNA.393-201ENST00000383936 102 ntBASIC5.31□□□□□ -1.56
RNF40O75150 RNA5SP87-201ENST00000384155 118 ntBASIC5.31□□□□□ -1.56
RNF40O75150 Y_RNA.495-201ENST00000384435 112 ntBASIC5.31□□□□□ -1.56
RNF40O75150 MIR526A2-201ENST00000390198 65 ntBASIC5.31□□□□□ -1.56
RNF40O75150 AL512633.1-201ENST00000399931 655 ntBASIC5.31□□□□□ -1.56
RNF40O75150 MIR1182-201ENST00000408363 97 ntBASIC5.31□□□□□ -1.56
RNF40O75150 U3.40-201ENST00000408706 208 ntBASIC5.31□□□□□ -1.56
RNF40O75150 RNU6-1245P-201ENST00000411130 106 ntBASIC5.31□□□□□ -1.56
RNF40O75150 FTH1P6-201ENST00000430768 320 ntBASIC5.31□□□□□ -1.56
RNF40O75150 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF40O75150 AL121914.1-201ENST00000450188 156 ntBASIC5.31□□□□□ -1.56
RNF40O75150 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF40O75150 AC016632.1-201ENST00000503994 196 ntBASIC5.31□□□□□ -1.56
RNF40O75150 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF40O75150 RNU6-703P-201ENST00000516946 107 ntBASIC5.31□□□□□ -1.56
RNF40O75150 AC005868.1-201ENST00000536421 331 ntBASIC5.31□□□□□ -1.56
RNF40O75150 AC008033.2-201ENST00000542626 177 ntBASIC5.31□□□□□ -1.56
RNF40O75150 TRAV28-201ENST00000557548 323 ntBASIC5.31□□□□□ -1.56
RNF40O75150 RN7SL722P-201ENST00000617780 284 ntBASIC5.31□□□□□ -1.56
RNF40O75150 RN7SL565P-201ENST00000618246 284 ntBASIC5.31□□□□□ -1.56
RNF40O75150 AL445567.2-201ENST00000618935 498 ntBASIC5.31□□□□□ -1.56
RNF40O75150 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.31□□□□□ -1.56
RNF40O75150 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF40O75150 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF40O75150 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF40O75150 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF40O75150 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF40O75150 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RNF40O75150 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RNF40O75150 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
RNF40O75150 SCARNA15-201ENST00000607520 4325 ntBASIC5.3□□□□□ -1.56
RNF40O75150 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF40O75150 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF40O75150 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF40O75150 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF40O75150 Y_RNA.24-201ENST00000362508 103 ntBASIC5.3□□□□□ -1.56
RNF40O75150 RNU6-799P-201ENST00000363567 107 ntBASIC5.3□□□□□ -1.56
RNF40O75150 Y_RNA.287-201ENST00000364853 94 ntBASIC5.3□□□□□ -1.56
RNF40O75150 RNU6-793P-201ENST00000384233 104 ntBASIC5.3□□□□□ -1.56
RNF40O75150 SNORA26.3-201ENST00000391119 136 ntBASIC5.3□□□□□ -1.56
RNF40O75150 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF40O75150 RPS29P10-201ENST00000439197 166 ntBASIC5.3□□□□□ -1.56
RNF40O75150 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF40O75150 AC245047.8-201ENST00000456455 284 ntBASIC5.3□□□□□ -1.56
RNF40O75150 Y_RNA.651-201ENST00000459380 103 ntBASIC5.3□□□□□ -1.56
RNF40O75150 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF40O75150 RNU6-561P-201ENST00000516222 102 ntBASIC5.3□□□□□ -1.56
RNF40O75150 RNU6-1183P-201ENST00000517054 60 ntBASIC5.3□□□□□ -1.56
RNF40O75150 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.3□□□□□ -1.56
RNF40O75150 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.3□□□□□ -1.56
RNF40O75150 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF40O75150 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.3□□□□□ -1.56
RNF40O75150 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF40O75150 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF40O75150 MIR3921-201ENST00000577308 85 ntBASIC5.3□□□□□ -1.56
RNF40O75150 AC136601.2-201ENST00000604356 474 ntBASIC5.3□□□□□ -1.56
RNF40O75150 AL591926.8-201ENST00000616876 211 ntBASIC5.3□□□□□ -1.56
RNF40O75150 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF40O75150 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF40O75150 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RNF40O75150 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF40O75150 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF40O75150 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF40O75150 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF40O75150 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF40O75150 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RNF40O75150 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF40O75150 RNU6-1141P-201ENST00000364520 107 ntBASIC5.29□□□□□ -1.56
RNF40O75150 RNVU1-6-201ENST00000364688 164 ntBASIC5.29□□□□□ -1.56
RNF40O75150 Y_RNA.293-201ENST00000364908 93 ntBASIC5.29□□□□□ -1.56
RNF40O75150 RNU6-969P-201ENST00000383900 105 ntBASIC5.29□□□□□ -1.56
RNF40O75150 SNORA75.5-201ENST00000391291 81 ntBASIC5.29□□□□□ -1.56
RNF40O75150 AC245028.1-201ENST00000423259 256 ntBASIC5.29□□□□□ -1.56
RNF40O75150 AC092017.2-201ENST00000427600 362 ntBASIC5.29□□□□□ -1.56
RNF40O75150 AC009238.2-201ENST00000431026 355 ntBASIC5.29□□□□□ -1.56
RNF40O75150 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF40O75150 HMGB3P8-201ENST00000449709 577 ntBASIC5.29□□□□□ -1.56
RNF40O75150 AC008897.1-201ENST00000494006 347 ntBASIC5.29□□□□□ -1.56
RNF40O75150 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF40O75150 HSPE1P4-201ENST00000550617 308 ntBASIC5.29□□□□□ -1.56
RNF40O75150 CYCSP40-201ENST00000575927 294 ntBASIC5.29□□□□□ -1.56
RNF40O75150 SNORD84-203ENST00000584275 78 ntBASIC5.29□□□□□ -1.56
RNF40O75150 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RNF40O75150 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF40O75150 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RNF40O75150 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF40O75150 AC090971.4-201ENST00000560291 1800 ntBASIC5.29□□□□□ -1.56
RNF40O75150 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF40O75150 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF40O75150 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF40O75150 AL450326.2-201ENST00000421913 1962 ntBASIC5.29□□□□□ -1.56
RNF40O75150 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF40O75150 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF40O75150 MAPK10-320ENST00000641462 6696 ntBASIC5.28□□□□□ -1.56
RNF40O75150 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF40O75150 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RNF40O75150 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF40O75150 RNU6-454P-201ENST00000364292 107 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms