Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 uc_338.12-201ENST00000616344 181 ntBASIC2.77□□□□□ -1.97
CACNA1FO60840 AC002550.2-201ENST00000621246 394 ntBASIC2.77□□□□□ -1.97
CACNA1FO60840 AL359893.1-201ENST00000447628 1580 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 RNU4-48P-201ENST00000365559 182 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 RNU6-903P-201ENST00000391270 109 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 SNORA26.7-201ENST00000391288 122 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CACNA1FO60840 RNU4-26P-201ENST00000410270 107 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 TAAR7P-201ENST00000436141 242 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 AC006483.1-201ENST00000487308 313 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.76□□□□□ -1.97
CACNA1FO60840 TTC39CP1-201ENST00000512513 755 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.76□□□□□ -1.97
CACNA1FO60840 AC011979.2-201ENST00000527568 352 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.76□□□□□ -1.97
CACNA1FO60840 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.76□□□□□ -1.97
CACNA1FO60840 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.76□□□□□ -1.97
CACNA1FO60840 MIR219B-201ENST00000637023 88 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 AL136164.4-201ENST00000625013 2135 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CACNA1FO60840 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CACNA1FO60840 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CACNA1FO60840 Y_RNA.166-201ENST00000363730 102 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 RNU6-641P-201ENST00000384006 107 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 Y_RNA.419-201ENST00000384041 102 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.76□□□□□ -1.97
CACNA1FO60840 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CACNA1FO60840 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.76□□□□□ -1.97
CACNA1FO60840 AC096638.1-201ENST00000444678 216 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 CBWD4P-201ENST00000445695 655 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 AL118520.1-201ENST00000450770 291 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 AC108059.3-201ENST00000456388 214 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 HMGN2P16-201ENST00000456802 261 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 AL049714.1-201ENST00000466686 347 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 MTCO3P44-201ENST00000510977 541 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.76□□□□□ -1.97
CACNA1FO60840 SCARNA15.1-201ENST00000516384 125 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 AP003072.1-201ENST00000531740 145 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.76□□□□□ -1.97
CACNA1FO60840 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.76□□□□□ -1.97
CACNA1FO60840 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.76□□□□□ -1.97
CACNA1FO60840 PART1_1.1-201ENST00000611761 217 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.76□□□□□ -1.97
CACNA1FO60840 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CACNA1FO60840 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CACNA1FO60840 MTND4P23-201ENST00000447723 1363 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.75□□□□□ -1.97
CACNA1FO60840 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CACNA1FO60840 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.75□□□□□ -1.97
CACNA1FO60840 Y_RNA.58-201ENST00000362807 102 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 Y_RNA.154-201ENST00000363624 102 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 RNY4P16-201ENST00000364768 94 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 RNY3P1-201ENST00000365085 102 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 RNY3-201ENST00000365484 102 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 Y_RNA.367-201ENST00000365544 101 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 Y_RNA.490-201ENST00000384413 102 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 Y_RNA.509-201ENST00000384506 99 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 MIR19A-201ENST00000384878 82 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 MIR454-201ENST00000390180 115 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CACNA1FO60840 AL606923.1-201ENST00000406616 190 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.75□□□□□ -1.97
CACNA1FO60840 RPL7L1P10-201ENST00000427790 463 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 Z98742.2-201ENST00000431564 187 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 AC005094.1-201ENST00000440420 368 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 MTND1P9-201ENST00000453775 944 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 AL162395.1-201ENST00000457882 422 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 SNORD97-201ENST00000459187 142 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 RPL21P99-201ENST00000480369 423 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 RPL38P4-201ENST00000502376 214 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CACNA1FO60840 MTND4LP22-201ENST00000508209 276 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.75□□□□□ -1.97
CACNA1FO60840 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.75□□□□□ -1.97
CACNA1FO60840 AP000889.2-201ENST00000532684 490 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.75□□□□□ -1.97
CACNA1FO60840 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.75□□□□□ -1.97
CACNA1FO60840 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.75□□□□□ -1.97
CACNA1FO60840 SNORA50A-202ENST00000629536 136 ntBASIC2.75□□□□□ -1.97
CACNA1FO60840 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
CACNA1FO60840 Y_RNA.231-201ENST00000364358 102 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU6-169P-201ENST00000365336 107 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU5E-6P-201ENST00000365574 115 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU6-878P-201ENST00000384578 110 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU6-1011P-201ENST00000384668 107 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 MIR1302-11-201ENST00000408051 138 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 MIR1302-9-201ENST00000408365 138 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 MIR1302-10-201ENST00000408734 138 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU6-193P-201ENST00000410977 107 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.74□□□□□ -1.97
CACNA1FO60840 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.74□□□□□ -1.97
CACNA1FO60840 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.74□□□□□ -1.97
CACNA1FO60840 SNRPEP4-201ENST00000435815 279 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.74□□□□□ -1.97
CACNA1FO60840 AC073415.1-201ENST00000449240 153 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 AC234775.1-201ENST00000454247 670 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU7-66P-201ENST00000459469 62 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 GMFBP1-201ENST00000467831 427 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 AL163973.1-201ENST00000484753 577 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms