Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.51□□□□□ -1.69
GRIN3BO60391 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.51□□□□□ -1.69
GRIN3BO60391 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.51□□□□□ -1.69
GRIN3BO60391 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.51□□□□□ -1.69
GRIN3BO60391 AL355297.3-201ENST00000604082 446 ntBASIC4.51□□□□□ -1.69
GRIN3BO60391 AL121917.1-203ENST00000605534 577 ntBASIC4.51□□□□□ -1.69
GRIN3BO60391 SNORA62.6-201ENST00000606322 83 ntBASIC4.51□□□□□ -1.69
GRIN3BO60391 AC090132.2-201ENST00000615881 347 ntBASIC4.51□□□□□ -1.69
GRIN3BO60391 MAPK10-253ENST00000641010 4072 ntBASIC4.51□□□□□ -1.69
GRIN3BO60391 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GRIN3BO60391 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
GRIN3BO60391 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GRIN3BO60391 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.51□□□□□ -1.69
GRIN3BO60391 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.51□□□□□ -1.69
GRIN3BO60391 MFSD8-236ENST00000641509 4050 ntBASIC4.51□□□□□ -1.69
GRIN3BO60391 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
GRIN3BO60391 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.5□□□□□ -1.69
GRIN3BO60391 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.5□□□□□ -1.69
GRIN3BO60391 SNORD14B-201ENST00000364533 90 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 RNU6-741P-201ENST00000383889 107 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 RNU6-1109P-201ENST00000391187 107 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 AL591034.2-201ENST00000402839 359 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 AL513475.1-201ENST00000406602 315 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 MIR548M-201ENST00000408260 86 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.5□□□□□ -1.69
GRIN3BO60391 AL353752.1-201ENST00000454946 260 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 snoU13.4-201ENST00000458916 104 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.5□□□□□ -1.69
GRIN3BO60391 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.5□□□□□ -1.69
GRIN3BO60391 Y_RNA.680-201ENST00000516441 93 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.5□□□□□ -1.69
GRIN3BO60391 Z98751.3-201ENST00000604447 521 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 AL021879.1-201ENST00000611756 288 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.5□□□□□ -1.69
GRIN3BO60391 AC138627.2-201ENST00000624202 601 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.5□□□□□ -1.69
GRIN3BO60391 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.5□□□□□ -1.69
GRIN3BO60391 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.5□□□□□ -1.69
GRIN3BO60391 AC008669.1-201ENST00000565823 2178 ntBASIC4.5□□□□□ -1.69
GRIN3BO60391 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GRIN3BO60391 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GRIN3BO60391 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.49□□□□□ -1.69
GRIN3BO60391 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.49□□□□□ -1.69
GRIN3BO60391 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.49□□□□□ -1.69
GRIN3BO60391 U8.8-201ENST00000365399 135 ntBASIC4.49□□□□□ -1.69
GRIN3BO60391 RHOT1P2-201ENST00000366423 333 ntBASIC4.49□□□□□ -1.69
GRIN3BO60391 Y_RNA.424-201ENST00000384063 103 ntBASIC4.49□□□□□ -1.69
GRIN3BO60391 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GRIN3BO60391 AC025750.2-201ENST00000442609 450 ntBASIC4.49□□□□□ -1.69
GRIN3BO60391 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.49□□□□□ -1.69
GRIN3BO60391 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.49□□□□□ -1.69
GRIN3BO60391 RNU6-1143P-201ENST00000516125 104 ntBASIC4.49□□□□□ -1.69
GRIN3BO60391 SNORA31.8-201ENST00000516327 108 ntBASIC4.49□□□□□ -1.69
GRIN3BO60391 SNORA40.14-201ENST00000516543 86 ntBASIC4.49□□□□□ -1.69
GRIN3BO60391 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.49□□□□□ -1.69
GRIN3BO60391 MIR4273-201ENST00000582824 84 ntBASIC4.49□□□□□ -1.69
GRIN3BO60391 AL645944.1-201ENST00000603857 493 ntBASIC4.49□□□□□ -1.69
GRIN3BO60391 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.49□□□□□ -1.69
GRIN3BO60391 MIR4272-201ENST00000635924 64 ntBASIC4.49□□□□□ -1.69
GRIN3BO60391 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GRIN3BO60391 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
GRIN3BO60391 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GRIN3BO60391 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
GRIN3BO60391 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.49□□□□□ -1.69
GRIN3BO60391 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GRIN3BO60391 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
GRIN3BO60391 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.48□□□□□ -1.69
GRIN3BO60391 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
GRIN3BO60391 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GRIN3BO60391 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GRIN3BO60391 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
GRIN3BO60391 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GRIN3BO60391 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
GRIN3BO60391 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GRIN3BO60391 Y_RNA.152-201ENST00000363578 100 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 SNORA7.2-201ENST00000364446 145 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 Y_RNA.314-201ENST00000365114 102 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.48□□□□□ -1.69
GRIN3BO60391 Y_RNA.485-201ENST00000384395 102 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 Y_RNA.623-201ENST00000411128 95 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GRIN3BO60391 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.48□□□□□ -1.69
GRIN3BO60391 AL590383.1-201ENST00000428602 75 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 AL627311.1-201ENST00000431514 115 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 RPS15AP10-201ENST00000432472 382 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.48□□□□□ -1.69
GRIN3BO60391 AL392103.1-201ENST00000447000 198 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 AL031274.1-201ENST00000450334 232 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.48□□□□□ -1.69
GRIN3BO60391 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.48□□□□□ -1.69
GRIN3BO60391 AC093663.1-201ENST00000497190 394 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 RNA5SP290-201ENST00000517133 127 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 CBX3P8-201ENST00000532412 525 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.48□□□□□ -1.69
GRIN3BO60391 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.48□□□□□ -1.69
GRIN3BO60391 AC007375.1-201ENST00000554513 578 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.48□□□□□ -1.69
GRIN3BO60391 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.48□□□□□ -1.69
GRIN3BO60391 AC100812.1-201ENST00000607622 580 ntBASIC4.48□□□□□ -1.69
GRIN3BO60391 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms