Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM1O15116 AL137159.1-201ENST00000452808 512 ntBASIC1.81□□□□□ -2.12
LSM1O15116 AL583843.1-201ENST00000456070 346 ntBASIC1.81□□□□□ -2.12
LSM1O15116 AP001025.1-201ENST00000486139 332 ntBASIC1.81□□□□□ -2.12
LSM1O15116 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LSM1O15116 MTATP6P9-201ENST00000515039 680 ntBASIC1.81□□□□□ -2.12
LSM1O15116 Y_RNA.689-201ENST00000516589 107 ntBASIC1.81□□□□□ -2.12
LSM1O15116 AP005639.2-201ENST00000527592 928 ntBASIC1.81□□□□□ -2.12
LSM1O15116 CYCSP27-201ENST00000527643 293 ntBASIC1.81□□□□□ -2.12
LSM1O15116 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
LSM1O15116 AC073410.2-201ENST00000603240 332 ntBASIC1.81□□□□□ -2.12
LSM1O15116 AC021646.1-201ENST00000605469 484 ntBASIC1.81□□□□□ -2.12
LSM1O15116 MIR3529-201ENST00000637713 78 ntBASIC1.81□□□□□ -2.12
LSM1O15116 AL445523.1-201ENST00000451184 1362 ntBASIC1.81□□□□□ -2.12
LSM1O15116 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.81□□□□□ -2.12
LSM1O15116 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.81□□□□□ -2.12
LSM1O15116 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.8□□□□□ -2.12
LSM1O15116 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LSM1O15116 SNORD3E-201ENST00000362899 217 ntBASIC1.8□□□□□ -2.12
LSM1O15116 RNU4-1-201ENST00000363925 141 ntBASIC1.8□□□□□ -2.12
LSM1O15116 RNU6-72P-201ENST00000384285 79 ntBASIC1.8□□□□□ -2.12
LSM1O15116 SNORA8-201ENST00000384574 139 ntBASIC1.8□□□□□ -2.12
LSM1O15116 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.8□□□□□ -2.12
LSM1O15116 RNU6-1140P-201ENST00000410517 106 ntBASIC1.8□□□□□ -2.12
LSM1O15116 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.8□□□□□ -2.12
LSM1O15116 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.8□□□□□ -2.12
LSM1O15116 AL606662.1-201ENST00000445763 553 ntBASIC1.8□□□□□ -2.12
LSM1O15116 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.8□□□□□ -2.12
LSM1O15116 AC087884.1-201ENST00000469738 328 ntBASIC1.8□□□□□ -2.12
LSM1O15116 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.8□□□□□ -2.12
LSM1O15116 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.8□□□□□ -2.12
LSM1O15116 CBX3P4-201ENST00000538909 354 ntBASIC1.8□□□□□ -2.12
LSM1O15116 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
LSM1O15116 MIR4999-201ENST00000585029 91 ntBASIC1.8□□□□□ -2.12
LSM1O15116 CLIC4P2-201ENST00000601934 717 ntBASIC1.8□□□□□ -2.12
LSM1O15116 AC018714.1-201ENST00000605028 208 ntBASIC1.8□□□□□ -2.12
LSM1O15116 AC093788.1-201ENST00000609356 927 ntBASIC1.8□□□□□ -2.12
LSM1O15116 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.8□□□□□ -2.12
LSM1O15116 AL031667.3-201ENST00000620124 655 ntBASIC1.8□□□□□ -2.12
LSM1O15116 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LSM1O15116 MIR412-201ENST00000362142 91 ntBASIC1.79□□□□□ -2.12
LSM1O15116 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.79□□□□□ -2.12
LSM1O15116 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LSM1O15116 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.79□□□□□ -2.12
LSM1O15116 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM1O15116 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM1O15116 RNU2-53P-201ENST00000516257 147 ntBASIC1.79□□□□□ -2.12
LSM1O15116 RNU6-667P-201ENST00000517186 102 ntBASIC1.79□□□□□ -2.12
LSM1O15116 RNU6-586P-201ENST00000517265 104 ntBASIC1.79□□□□□ -2.12
LSM1O15116 RANP3-201ENST00000530970 276 ntBASIC1.79□□□□□ -2.12
LSM1O15116 ZNF519P3-201ENST00000557158 1032 ntBASIC1.79□□□□□ -2.12
LSM1O15116 AC022254.1-201ENST00000567857 235 ntBASIC1.79□□□□□ -2.12
LSM1O15116 MTND1P8-201ENST00000571424 950 ntBASIC1.79□□□□□ -2.12
LSM1O15116 MTCYBP33-201ENST00000575007 1130 ntBASIC1.79□□□□□ -2.12
LSM1O15116 AC026271.5-201ENST00000577873 130 ntBASIC1.79□□□□□ -2.12
LSM1O15116 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM1O15116 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.79□□□□□ -2.12
LSM1O15116 BNIP3P30-201ENST00000601184 574 ntBASIC1.79□□□□□ -2.12
LSM1O15116 AL138889.2-201ENST00000603883 242 ntBASIC1.79□□□□□ -2.12
LSM1O15116 AP002360.4-201ENST00000606980 481 ntBASIC1.79□□□□□ -2.12
LSM1O15116 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.79□□□□□ -2.12
LSM1O15116 AL132822.1-201ENST00000617063 513 ntBASIC1.79□□□□□ -2.12
LSM1O15116 AC022306.3-201ENST00000619930 550 ntBASIC1.79□□□□□ -2.12
LSM1O15116 AL607023.1-201ENST00000620045 248 ntBASIC1.79□□□□□ -2.12
LSM1O15116 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.79□□□□□ -2.12
LSM1O15116 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.79□□□□□ -2.12
LSM1O15116 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LSM1O15116 FARSBP1-201ENST00000435808 1778 ntBASIC1.78□□□□□ -2.12
LSM1O15116 RNU6-529P-201ENST00000363383 104 ntBASIC1.78□□□□□ -2.12
LSM1O15116 SNORD14B-201ENST00000364533 90 ntBASIC1.78□□□□□ -2.12
LSM1O15116 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
LSM1O15116 RNU6-1200P-201ENST00000384162 107 ntBASIC1.78□□□□□ -2.12
LSM1O15116 RNU6-997P-201ENST00000384725 107 ntBASIC1.78□□□□□ -2.12
LSM1O15116 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LSM1O15116 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.78□□□□□ -2.12
LSM1O15116 AC244636.1-201ENST00000421152 228 ntBASIC1.78□□□□□ -2.12
LSM1O15116 RPS27AP14-201ENST00000422868 454 ntBASIC1.78□□□□□ -2.12
LSM1O15116 AL627311.1-201ENST00000431514 115 ntBASIC1.78□□□□□ -2.12
LSM1O15116 RPL37P21-201ENST00000435890 276 ntBASIC1.78□□□□□ -2.12
LSM1O15116 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.78□□□□□ -2.12
LSM1O15116 snoU13.14-201ENST00000459372 104 ntBASIC1.78□□□□□ -2.12
LSM1O15116 AC006512.1-201ENST00000468816 291 ntBASIC1.78□□□□□ -2.12
LSM1O15116 BZW1P2-201ENST00000473537 826 ntBASIC1.78□□□□□ -2.12
LSM1O15116 AC104010.1-201ENST00000616889 150 ntBASIC1.78□□□□□ -2.12
LSM1O15116 AC024940.5-201ENST00000622889 474 ntBASIC1.78□□□□□ -2.12
LSM1O15116 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
LSM1O15116 RPL23AP39-201ENST00000415533 405 ntBASIC1.77□□□□□ -2.13
LSM1O15116 AC006366.1-201ENST00000422002 759 ntBASIC1.77□□□□□ -2.13
LSM1O15116 RPL23AP30-201ENST00000432419 501 ntBASIC1.77□□□□□ -2.13
LSM1O15116 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.77□□□□□ -2.13
LSM1O15116 AC118469.1-201ENST00000442943 488 ntBASIC1.77□□□□□ -2.13
LSM1O15116 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.77□□□□□ -2.13
LSM1O15116 AL121594.1-201ENST00000475906 575 ntBASIC1.77□□□□□ -2.13
LSM1O15116 HMGB1P30-201ENST00000492455 606 ntBASIC1.77□□□□□ -2.13
LSM1O15116 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
LSM1O15116 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.77□□□□□ -2.13
LSM1O15116 AC112206.3-201ENST00000514578 389 ntBASIC1.77□□□□□ -2.13
LSM1O15116 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.77□□□□□ -2.13
LSM1O15116 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.77□□□□□ -2.13
LSM1O15116 AC011979.2-201ENST00000527568 352 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms