Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AL161670.1-201ENST00000554348 137 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 MTCYBP23-201ENST00000558717 1102 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AC023813.2-201ENST00000564321 469 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AC025678.1-201ENST00000567861 338 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.32□□□□□ -2.2
UBFD1O14562 AL358072.1-201ENST00000604156 575 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AL355472.4-201ENST00000610233 626 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 RMST_6.1-201ENST00000611980 203 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AL773524.1-201ENST00000614065 229 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.32□□□□□ -2.2
UBFD1O14562 AC233981.2-201ENST00000611524 1614 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 ZNF209P-201ENST00000593450 2304 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 FCF1P10-201ENST00000407590 479 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 RN7SKP266-201ENST00000410232 287 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 AP000275.1-201ENST00000411943 390 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
UBFD1O14562 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.31□□□□□ -2.2
UBFD1O14562 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.31□□□□□ -2.2
UBFD1O14562 AL357134.1-201ENST00000445848 426 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 RPL36AP21-201ENST00000490372 323 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 AC018437.1-201ENST00000492214 406 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 MTCYBP18-201ENST00000501056 747 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 HMGB1P35-201ENST00000503360 598 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 MTCYBP43-201ENST00000513621 740 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 RNA5SP445-201ENST00000515889 115 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 RNU6-572P-201ENST00000516724 80 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 RNA5SP137-201ENST00000516833 135 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 RNU6-467P-201ENST00000517027 110 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 RNA5SP490-201ENST00000517141 136 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.31□□□□□ -2.2
UBFD1O14562 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.31□□□□□ -2.2
UBFD1O14562 AC135279.1-201ENST00000543493 504 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.31□□□□□ -2.2
UBFD1O14562 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.31□□□□□ -2.2
UBFD1O14562 BCRP9-201ENST00000605312 388 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.31□□□□□ -2.2
UBFD1O14562 Z99571.1-201ENST00000636677 394 ntBASIC1.31□□□□□ -2.2
UBFD1O14562 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.31□□□□□ -2.2
UBFD1O14562 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.31□□□□□ -2.2
UBFD1O14562 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.31□□□□□ -2.2
UBFD1O14562 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
UBFD1O14562 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
UBFD1O14562 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.31□□□□□ -2.2
UBFD1O14562 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 Y_RNA.40-201ENST00000362645 93 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 MIR518A2-201ENST00000384966 87 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 RNU6-1000P-201ENST00000391066 106 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 RNU4-22P-201ENST00000411058 166 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.3□□□□□ -2.2
UBFD1O14562 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.3□□□□□ -2.2
UBFD1O14562 VPS26BP1-201ENST00000417155 755 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 AL353621.1-201ENST00000418219 243 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 AC083875.1-201ENST00000419509 405 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.3□□□□□ -2.2
UBFD1O14562 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.3□□□□□ -2.2
UBFD1O14562 RPL7P34-201ENST00000433316 712 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 MTCO2P20-201ENST00000437339 673 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 MTND4P25-201ENST00000441039 533 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.3□□□□□ -2.2
UBFD1O14562 NEFMP1-201ENST00000443423 1006 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.3□□□□□ -2.2
UBFD1O14562 RPL37P6-201ENST00000460682 294 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.3□□□□□ -2.2
UBFD1O14562 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.3□□□□□ -2.2
UBFD1O14562 AC027575.1-201ENST00000481064 460 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 RPL39P36-201ENST00000490784 156 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 AC023194.1-201ENST00000493084 308 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UBFD1O14562 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
UBFD1O14562 AC010376.1-201ENST00000522101 334 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 MTND1P36-201ENST00000522384 936 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.3□□□□□ -2.2
UBFD1O14562 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.3□□□□□ -2.2
UBFD1O14562 DEFB108A-201ENST00000530110 222 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 OR5B19P-201ENST00000531766 928 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 LINC00933-203ENST00000559812 219 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 AL078603.1-201ENST00000603824 313 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 AC090970.3-201ENST00000612566 866 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.3□□□□□ -2.2
UBFD1O14562 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 AC099654.8-201ENST00000637757 681 ntBASIC1.3□□□□□ -2.2
UBFD1O14562 RNU6-462P-201ENST00000362659 105 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 RNU6-433P-201ENST00000363216 104 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 RNU6-1284P-201ENST00000363701 100 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 RNU6-392P-201ENST00000364926 101 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 SNORA4.3-201ENST00000365564 137 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 Y_RNA.465-201ENST00000384293 102 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 AL033519.2-201ENST00000403958 392 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 PIGPP2-201ENST00000411569 458 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 OR9R1P-201ENST00000412200 877 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 RPS12P24-201ENST00000412619 387 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 VN1R36P-201ENST00000414936 291 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.29□□□□□ -2.2
UBFD1O14562 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.29□□□□□ -2.2
UBFD1O14562 USP9YP24-201ENST00000434374 697 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 MTCO1P53-201ENST00000441633 699 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.29□□□□□ -2.2
UBFD1O14562 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms