Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR222-201ENST00000384992 110 ntBASIC2.58□□□□□ -2
CUX2O14529 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.58□□□□□ -2
CUX2O14529 AC006366.1-201ENST00000422002 759 ntBASIC2.58□□□□□ -2
CUX2O14529 AC010099.3-201ENST00000423896 409 ntBASIC2.58□□□□□ -2
CUX2O14529 HMGN2P19-201ENST00000425149 265 ntBASIC2.58□□□□□ -2
CUX2O14529 GPM6BP2-201ENST00000432046 144 ntBASIC2.58□□□□□ -2
CUX2O14529 AL445305.1-201ENST00000432577 575 ntBASIC2.58□□□□□ -2
CUX2O14529 LARP1BP3-201ENST00000437229 869 ntBASIC2.58□□□□□ -2
CUX2O14529 MTND4P25-201ENST00000441039 533 ntBASIC2.58□□□□□ -2
CUX2O14529 AL606662.1-201ENST00000445763 553 ntBASIC2.58□□□□□ -2
CUX2O14529 GPM6BP1-201ENST00000446387 144 ntBASIC2.58□□□□□ -2
CUX2O14529 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.58□□□□□ -2
CUX2O14529 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.58□□□□□ -2
CUX2O14529 MTND2P14-201ENST00000482139 351 ntBASIC2.58□□□□□ -2
CUX2O14529 RPS15AP34-201ENST00000487776 387 ntBASIC2.58□□□□□ -2
CUX2O14529 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.58□□□□□ -2
CUX2O14529 AC105252.1-201ENST00000503089 286 ntBASIC2.58□□□□□ -2
CUX2O14529 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.58□□□□□ -2
CUX2O14529 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.58□□□□□ -2
CUX2O14529 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.58□□□□□ -2
CUX2O14529 AC098657.3-201ENST00000620434 263 ntBASIC2.58□□□□□ -2
CUX2O14529 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.58□□□□□ -2
CUX2O14529 SNORD56.5-201ENST00000364281 72 ntBASIC2.57□□□□□ -2
CUX2O14529 RNU6-701P-201ENST00000384059 107 ntBASIC2.57□□□□□ -2
CUX2O14529 MIR216A-201ENST00000385063 110 ntBASIC2.57□□□□□ -2
CUX2O14529 ELOCP17-201ENST00000414751 326 ntBASIC2.57□□□□□ -2
CUX2O14529 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.57□□□□□ -2
CUX2O14529 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.57□□□□□ -2
CUX2O14529 MRPS36P2-201ENST00000512569 299 ntBASIC2.57□□□□□ -2
CUX2O14529 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.57□□□□□ -2
CUX2O14529 RNU6-1003P-201ENST00000517099 105 ntBASIC2.57□□□□□ -2
CUX2O14529 RNA5SP165-201ENST00000517142 115 ntBASIC2.57□□□□□ -2
CUX2O14529 MTND4LP18-201ENST00000526864 291 ntBASIC2.57□□□□□ -2
CUX2O14529 MIR5000-201ENST00000577717 103 ntBASIC2.57□□□□□ -2
CUX2O14529 AP000403.1-201ENST00000603349 851 ntBASIC2.57□□□□□ -2
CUX2O14529 AC121334.2-201ENST00000605387 271 ntBASIC2.57□□□□□ -2
CUX2O14529 uc_338.20-201ENST00000621563 178 ntBASIC2.57□□□□□ -2
CUX2O14529 FRG1KP-201ENST00000623592 341 ntBASIC2.57□□□□□ -2
CUX2O14529 AC079416.3-201ENST00000624479 549 ntBASIC2.57□□□□□ -2
CUX2O14529 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CUX2O14529 RNU5A-8P-201ENST00000364102 114 ntBASIC2.56□□□□□ -2
CUX2O14529 RNY3P13-201ENST00000365542 102 ntBASIC2.56□□□□□ -2
CUX2O14529 AL359634.1-202ENST00000404721 284 ntBASIC2.56□□□□□ -2
CUX2O14529 AC104651.1-201ENST00000427559 735 ntBASIC2.56□□□□□ -2
CUX2O14529 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.56□□□□□ -2
CUX2O14529 RN7SKP265-201ENST00000516448 223 ntBASIC2.56□□□□□ -2
CUX2O14529 SUB1P1-201ENST00000524415 382 ntBASIC2.56□□□□□ -2
CUX2O14529 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.56□□□□□ -2
CUX2O14529 PCMTD1P2-201ENST00000565017 355 ntBASIC2.56□□□□□ -2
CUX2O14529 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.56□□□□□ -2
CUX2O14529 MIR3146-201ENST00000580367 79 ntBASIC2.56□□□□□ -2
CUX2O14529 MIR3660-201ENST00000584845 100 ntBASIC2.56□□□□□ -2
CUX2O14529 DPPA3P3-201ENST00000603842 430 ntBASIC2.56□□□□□ -2
CUX2O14529 MIR7515-201ENST00000637837 67 ntBASIC2.56□□□□□ -2
CUX2O14529 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CUX2O14529 RNU6-512P-201ENST00000364438 103 ntBASIC2.55□□□□□ -2
CUX2O14529 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.55□□□□□ -2
CUX2O14529 AC023141.4-201ENST00000412031 328 ntBASIC2.55□□□□□ -2
CUX2O14529 NDUFS5P4-201ENST00000412983 318 ntBASIC2.55□□□□□ -2
CUX2O14529 BPY2DP-201ENST00000422208 265 ntBASIC2.55□□□□□ -2
CUX2O14529 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.55□□□□□ -2
CUX2O14529 GTF2IP20-201ENST00000431663 360 ntBASIC2.55□□□□□ -2
CUX2O14529 SNORA31.18-201ENST00000517043 134 ntBASIC2.55□□□□□ -2
CUX2O14529 AC019176.1-201ENST00000518519 225 ntBASIC2.55□□□□□ -2
CUX2O14529 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.55□□□□□ -2
CUX2O14529 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.55□□□□□ -2
CUX2O14529 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.55□□□□□ -2
CUX2O14529 AC121758.2-201ENST00000553271 193 ntBASIC2.55□□□□□ -2
CUX2O14529 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.55□□□□□ -2
CUX2O14529 AC007151.1-201ENST00000572774 483 ntBASIC2.55□□□□□ -2
CUX2O14529 MIR4293-201ENST00000584305 78 ntBASIC2.55□□□□□ -2
CUX2O14529 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.55□□□□□ -2
CUX2O14529 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.55□□□□□ -2
CUX2O14529 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.55□□□□□ -2
CUX2O14529 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.55□□□□□ -2
CUX2O14529 AL596028.1-201ENST00000326971 197 ntBASIC2.54□□□□□ -2
CUX2O14529 Y_RNA.46-201ENST00000362695 102 ntBASIC2.54□□□□□ -2
CUX2O14529 RNU6-660P-201ENST00000364566 109 ntBASIC2.54□□□□□ -2
CUX2O14529 RNU4-52P-201ENST00000384209 138 ntBASIC2.54□□□□□ -2
CUX2O14529 RPS20P2-201ENST00000402520 389 ntBASIC2.54□□□□□ -2
CUX2O14529 EBAG9P1-201ENST00000418955 543 ntBASIC2.54□□□□□ -2
CUX2O14529 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.54□□□□□ -2
CUX2O14529 RPS27AP14-201ENST00000422868 454 ntBASIC2.54□□□□□ -2
CUX2O14529 RAC1P6-201ENST00000423911 575 ntBASIC2.54□□□□□ -2
CUX2O14529 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.54□□□□□ -2
CUX2O14529 MED14P1-201ENST00000430517 648 ntBASIC2.54□□□□□ -2
CUX2O14529 MTND1P28-201ENST00000435623 950 ntBASIC2.54□□□□□ -2
CUX2O14529 OSTCP8-201ENST00000445117 448 ntBASIC2.54□□□□□ -2
CUX2O14529 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.54□□□□□ -2
CUX2O14529 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.54□□□□□ -2
CUX2O14529 AC114801.2-201ENST00000503825 781 ntBASIC2.54□□□□□ -2
CUX2O14529 RPL37P25-201ENST00000507308 276 ntBASIC2.54□□□□□ -2
CUX2O14529 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.54□□□□□ -2
CUX2O14529 MRPS36P3-201ENST00000519284 130 ntBASIC2.54□□□□□ -2
CUX2O14529 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.54□□□□□ -2
CUX2O14529 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.54□□□□□ -2
CUX2O14529 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.54□□□□□ -2
CUX2O14529 MRPS36P5-201ENST00000551909 298 ntBASIC2.54□□□□□ -2
CUX2O14529 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.54□□□□□ -2
CUX2O14529 AC012435.1-202ENST00000568772 240 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms