Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SNORA63.7-201ENST00000365579 123 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 SNORA48.2-201ENST00000390926 124 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 MIR548F5-201ENST00000408421 86 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 RNU6-985P-201ENST00000410182 104 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 Y_RNA.618-201ENST00000410949 107 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 RNU6-193P-201ENST00000410977 107 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 RNU6-370P-201ENST00000411008 104 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 RPS15AP6-201ENST00000420703 385 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 HMGN2P30-201ENST00000423237 256 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM38O00635 HMGB1P9-201ENST00000429856 646 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM38O00635 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM38O00635 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM38O00635 RNU4-29P-201ENST00000515943 174 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 RNU2-27P-201ENST00000516185 142 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 Y_RNA.682-201ENST00000516457 100 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 RNU6-1271P-201ENST00000517049 105 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 RNU6-988P-201ENST00000519081 107 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM38O00635 AP006245.1-201ENST00000522549 120 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM38O00635 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.49□□□□□ -1.85
TRIM38O00635 MIR3942-201ENST00000585264 109 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM38O00635 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 AL670379.4-201ENST00000605279 254 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 U2.21-201ENST00000637295 81 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
TRIM38O00635 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM38O00635 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM38O00635 MAPK10-322ENST00000641485 4530 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM38O00635 ZNF826P-207ENST00000622273 1910 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 AC093010.3-201ENST00000570269 15214 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
TRIM38O00635 AC068647.1-201ENST00000489539 2265 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TRIM38O00635 Y_RNA.33-201ENST00000362591 102 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 Y_RNA.47-201ENST00000362697 108 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 Y_RNA.100-201ENST00000363141 102 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RNU6-702P-201ENST00000364982 107 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RNU6-38P-201ENST00000384085 107 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RNU6-1026P-201ENST00000384465 108 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RNU6-903P-201ENST00000391270 109 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM38O00635 MIR548K-201ENST00000408406 116 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RNU4-26P-201ENST00000410270 107 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RNA5SP111-201ENST00000411386 101 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 NDUFS5P4-201ENST00000412983 318 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 AL160004.2-201ENST00000432935 350 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 MTND2P29-201ENST00000438595 412 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM38O00635 RPL37P4-201ENST00000448908 268 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM38O00635 RPL12P25-201ENST00000455592 494 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 BTF3P15-201ENST00000455606 336 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RPS4XP2-201ENST00000458402 793 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RNU6-333P-201ENST00000459117 107 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RPS29P2-201ENST00000479278 136 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RPL21P99-201ENST00000480369 423 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM38O00635 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM38O00635 RNU6-864P-201ENST00000516256 108 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RNU6-1088P-201ENST00000516850 104 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 RN7SKP295-201ENST00000517264 153 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM38O00635 MIR548AC-201ENST00000585049 88 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM38O00635 CYP2C61P-201ENST00000604072 290 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 AL365434.2-201ENST00000607979 234 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 AC022149.2-201ENST00000621061 203 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 U4.6-201ENST00000621618 127 ntBASIC3.48□□□□□ -1.85
TRIM38O00635 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.48□□□□□ -1.85
TRIM38O00635 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM38O00635 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM38O00635 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM38O00635 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM38O00635 RNU1-75P-201ENST00000347264 129 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 U3.12-201ENST00000364498 214 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 SNORA14A-201ENST00000364773 135 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 Y_RNA.373-201ENST00000365600 103 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 RNU6-198P-201ENST00000384258 104 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 Y_RNA.557-201ENST00000384680 107 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 SNORD17-201ENST00000390930 237 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 SNORD37.1-201ENST00000390968 65 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 RNA5SP252-201ENST00000391131 119 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 RNU2-3P-201ENST00000410144 191 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 HMGB3P2-201ENST00000411913 584 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 BX323014.1-201ENST00000412876 237 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 AC063979.1-201ENST00000415539 377 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM38O00635 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM38O00635 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM38O00635 AC005019.1-201ENST00000436455 431 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM38O00635 HIGD1AP11-201ENST00000438361 280 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms