Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 Y_RNA.33-201ENST00000362591 102 ntBASIC1.62□□□□□ -2.15
DFFAO00273 SNORD114-19-201ENST00000363072 75 ntBASIC1.62□□□□□ -2.15
DFFAO00273 RNU6-931P-201ENST00000363850 107 ntBASIC1.62□□□□□ -2.15
DFFAO00273 RNU1-57P-201ENST00000384491 166 ntBASIC1.62□□□□□ -2.15
DFFAO00273 SNORA40.19-201ENST00000390846 128 ntBASIC1.62□□□□□ -2.15
DFFAO00273 AC008267.5-201ENST00000424928 265 ntBASIC1.62□□□□□ -2.15
DFFAO00273 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.62□□□□□ -2.15
DFFAO00273 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.62□□□□□ -2.15
DFFAO00273 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.62□□□□□ -2.15
DFFAO00273 AC093899.1-201ENST00000457984 376 ntBASIC1.62□□□□□ -2.15
DFFAO00273 AL139824.2-201ENST00000458731 1095 ntBASIC1.62□□□□□ -2.15
DFFAO00273 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.62□□□□□ -2.15
DFFAO00273 RNU6-1092P-201ENST00000516955 87 ntBASIC1.62□□□□□ -2.15
DFFAO00273 MIR1273C-201ENST00000578669 77 ntBASIC1.62□□□□□ -2.15
DFFAO00273 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.62□□□□□ -2.15
DFFAO00273 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.62□□□□□ -2.15
DFFAO00273 RPL30P11-203ENST00000598995 310 ntBASIC1.62□□□□□ -2.15
DFFAO00273 AP001981.2-201ENST00000603241 418 ntBASIC1.62□□□□□ -2.15
DFFAO00273 ELOCP5-201ENST00000604924 333 ntBASIC1.62□□□□□ -2.15
DFFAO00273 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.62□□□□□ -2.15
DFFAO00273 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.62□□□□□ -2.15
DFFAO00273 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
DFFAO00273 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.62□□□□□ -2.15
DFFAO00273 MIR6715A-201ENST00000615929 79 ntBASIC1.62□□□□□ -2.15
DFFAO00273 AC108479.2-201ENST00000617314 601 ntBASIC1.62□□□□□ -2.15
DFFAO00273 AC103706.2-201ENST00000638080 240 ntBASIC1.62□□□□□ -2.15
DFFAO00273 AC092104.1-201ENST00000497346 1441 ntBASIC1.62□□□□□ -2.15
DFFAO00273 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
DFFAO00273 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.61□□□□□ -2.15
DFFAO00273 RNU5E-6P-201ENST00000365574 115 ntBASIC1.61□□□□□ -2.15
DFFAO00273 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
DFFAO00273 AC092809.3-201ENST00000415453 231 ntBASIC1.61□□□□□ -2.15
DFFAO00273 AC016831.2-201ENST00000417179 352 ntBASIC1.61□□□□□ -2.15
DFFAO00273 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.61□□□□□ -2.15
DFFAO00273 AL158823.1-201ENST00000418441 478 ntBASIC1.61□□□□□ -2.15
DFFAO00273 BX510359.4-201ENST00000423750 193 ntBASIC1.61□□□□□ -2.15
DFFAO00273 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.61□□□□□ -2.15
DFFAO00273 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.61□□□□□ -2.15
DFFAO00273 HSPE1P21-201ENST00000438283 308 ntBASIC1.61□□□□□ -2.15
DFFAO00273 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.61□□□□□ -2.15
DFFAO00273 AL137159.1-201ENST00000452808 512 ntBASIC1.61□□□□□ -2.15
DFFAO00273 HMGN2P23-201ENST00000456759 269 ntBASIC1.61□□□□□ -2.15
DFFAO00273 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.61□□□□□ -2.15
DFFAO00273 MED28P2-201ENST00000475771 317 ntBASIC1.61□□□□□ -2.15
DFFAO00273 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
DFFAO00273 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.61□□□□□ -2.15
DFFAO00273 OR5AL2P-201ENST00000532185 920 ntBASIC1.61□□□□□ -2.15
DFFAO00273 AC123904.2-201ENST00000548059 300 ntBASIC1.61□□□□□ -2.15
DFFAO00273 IMMP1LP2-201ENST00000552954 492 ntBASIC1.61□□□□□ -2.15
DFFAO00273 DEFB122-202ENST00000569013 197 ntBASIC1.61□□□□□ -2.15
DFFAO00273 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
DFFAO00273 MIR4255-201ENST00000579351 72 ntBASIC1.61□□□□□ -2.15
DFFAO00273 AC009977.1-201ENST00000586015 570 ntBASIC1.61□□□□□ -2.15
DFFAO00273 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.61□□□□□ -2.15
DFFAO00273 AC243960.4-201ENST00000600532 288 ntBASIC1.61□□□□□ -2.15
DFFAO00273 AC073410.2-201ENST00000603240 332 ntBASIC1.61□□□□□ -2.15
DFFAO00273 AC112187.2-201ENST00000604345 283 ntBASIC1.61□□□□□ -2.15
DFFAO00273 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
DFFAO00273 AC025754.2-201ENST00000606491 432 ntBASIC1.61□□□□□ -2.15
DFFAO00273 AC093788.1-201ENST00000609356 927 ntBASIC1.61□□□□□ -2.15
DFFAO00273 AC021755.4-201ENST00000616620 456 ntBASIC1.61□□□□□ -2.15
DFFAO00273 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
DFFAO00273 AC092656.1-203ENST00000624134 423 ntBASIC1.61□□□□□ -2.15
DFFAO00273 RNU1-17P-201ENST00000363022 152 ntBASIC1.6□□□□□ -2.15
DFFAO00273 RNU6-395P-201ENST00000365662 106 ntBASIC1.6□□□□□ -2.15
DFFAO00273 RNU6-157P-201ENST00000383957 107 ntBASIC1.6□□□□□ -2.15
DFFAO00273 SNORA75B-201ENST00000384053 137 ntBASIC1.6□□□□□ -2.15
DFFAO00273 RNU6-190P-201ENST00000384154 102 ntBASIC1.6□□□□□ -2.15
DFFAO00273 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
DFFAO00273 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
DFFAO00273 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.6□□□□□ -2.15
DFFAO00273 AC084290.1-201ENST00000434995 374 ntBASIC1.6□□□□□ -2.15
DFFAO00273 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.6□□□□□ -2.15
DFFAO00273 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.6□□□□□ -2.15
DFFAO00273 AC108210.2-201ENST00000503681 201 ntBASIC1.6□□□□□ -2.15
DFFAO00273 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.6□□□□□ -2.15
DFFAO00273 RNU6-1003P-201ENST00000517099 105 ntBASIC1.6□□□□□ -2.15
DFFAO00273 RNU6-586P-201ENST00000517265 104 ntBASIC1.6□□□□□ -2.15
DFFAO00273 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.6□□□□□ -2.15
DFFAO00273 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.6□□□□□ -2.15
DFFAO00273 AC093249.1-201ENST00000567049 203 ntBASIC1.6□□□□□ -2.15
DFFAO00273 AC025678.1-201ENST00000567861 338 ntBASIC1.6□□□□□ -2.15
DFFAO00273 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.6□□□□□ -2.15
DFFAO00273 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.6□□□□□ -2.15
DFFAO00273 AC174048.1-201ENST00000603389 144 ntBASIC1.6□□□□□ -2.15
DFFAO00273 AL078605.1-201ENST00000603529 500 ntBASIC1.6□□□□□ -2.15
DFFAO00273 SNRPGP17-201ENST00000603780 214 ntBASIC1.6□□□□□ -2.15
DFFAO00273 AC013244.3-201ENST00000605614 388 ntBASIC1.6□□□□□ -2.15
DFFAO00273 MIR15A-201ENST00000607334 83 ntBASIC1.6□□□□□ -2.15
DFFAO00273 RBBP8P1-201ENST00000449447 1844 ntBASIC1.6□□□□□ -2.15
DFFAO00273 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
DFFAO00273 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.59□□□□□ -2.15
DFFAO00273 RNU6-858P-201ENST00000362436 107 ntBASIC1.59□□□□□ -2.15
DFFAO00273 RNU5E-1-201ENST00000362477 120 ntBASIC1.59□□□□□ -2.15
DFFAO00273 RNU6-1010P-201ENST00000362757 107 ntBASIC1.59□□□□□ -2.15
DFFAO00273 RNU6-946P-201ENST00000383878 107 ntBASIC1.59□□□□□ -2.15
DFFAO00273 RNU6-906P-201ENST00000384700 70 ntBASIC1.59□□□□□ -2.15
DFFAO00273 RPS20P2-201ENST00000402520 389 ntBASIC1.59□□□□□ -2.15
DFFAO00273 AL356432.1-201ENST00000405809 419 ntBASIC1.59□□□□□ -2.15
DFFAO00273 RPS20P15-201ENST00000412792 311 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms