Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 AC008162.1-201ENST00000604718 254 ntBASIC3.15□□□□□ -1.91
C4orf47A7E2U8 AL670379.1-201ENST00000604752 252 ntBASIC3.15□□□□□ -1.91
C4orf47A7E2U8 AL670379.5-201ENST00000605253 252 ntBASIC3.15□□□□□ -1.91
C4orf47A7E2U8 AL670379.8-201ENST00000605353 252 ntBASIC3.15□□□□□ -1.91
C4orf47A7E2U8 AP000654.2-201ENST00000605633 586 ntBASIC3.15□□□□□ -1.91
C4orf47A7E2U8 AL670379.7-201ENST00000605823 252 ntBASIC3.15□□□□□ -1.91
C4orf47A7E2U8 AC091925.1-201ENST00000623204 462 ntBASIC3.15□□□□□ -1.91
C4orf47A7E2U8 AC000403.1-201ENST00000613696 3585 ntBASIC3.15□□□□□ -1.91
C4orf47A7E2U8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C4orf47A7E2U8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.15□□□□□ -1.91
C4orf47A7E2U8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C4orf47A7E2U8 MTND4P1-201ENST00000457501 1466 ntBASIC3.15□□□□□ -1.91
C4orf47A7E2U8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
C4orf47A7E2U8 AC009487.2-201ENST00000420969 6821 ntBASIC3.15□□□□□ -1.91
C4orf47A7E2U8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 RNU6-1309P-201ENST00000363305 108 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 SNORA71.1-201ENST00000364523 117 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 RNU6-550P-201ENST00000391057 101 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 AL139397.2-201ENST00000404529 772 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 EEF1A1P41-201ENST00000414667 207 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 RAC1P6-201ENST00000423911 575 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 UBE2D3P2-201ENST00000424409 445 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 MTND1P17-201ENST00000448961 204 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 ELOCP24-201ENST00000456370 334 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 RPL30P15-201ENST00000457129 321 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 Y_RNA.653-201ENST00000459091 95 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 RPS27P27-201ENST00000498779 255 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 MTCYBP40-201ENST00000509390 1135 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 AC098591.2-201ENST00000510152 315 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 RNU6-390P-201ENST00000516259 103 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 OR4H12P-201ENST00000556269 907 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 AC007938.3-201ENST00000604965 623 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 TPTE2P4-201ENST00000258589 1605 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 AC090740.1-201ENST00000623193 2262 ntBASIC3.14□□□□□ -1.91
C4orf47A7E2U8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C4orf47A7E2U8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 MTND5P19-201ENST00000424872 1794 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AC103988.1-201ENST00000566382 2177 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 Y_RNA.112-201ENST00000363250 102 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 Y_RNA.148-201ENST00000363557 117 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 Y_RNA.212-201ENST00000364177 102 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 RNU6-173P-201ENST00000364215 104 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 MIR184-201ENST00000384962 84 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 MIR568-201ENST00000385036 95 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 EIF4E2P1-201ENST00000393781 255 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 RNU4-46P-201ENST00000410818 138 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 RPS15AP27-201ENST00000449183 343 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 SCARNA18-201ENST00000459004 134 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 RPL23AP14-201ENST00000468281 468 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 RBBP4P6-201ENST00000508098 202 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AC108078.2-201ENST00000510750 236 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 RNU6-988P-201ENST00000519081 107 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 MED28P6-201ENST00000558776 231 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AC138761.3-201ENST00000579993 334 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 MIR5690-201ENST00000583739 73 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AC008521.1-201ENST00000587471 187 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AC023043.2-201ENST00000589678 1026 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AC103705.1-201ENST00000619013 241 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 MTND5P10-201ENST00000603719 1809 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 ZNF826P-207ENST00000622273 1910 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 AC093010.3-201ENST00000570269 15214 ntBASIC3.13□□□□□ -1.91
C4orf47A7E2U8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
C4orf47A7E2U8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
C4orf47A7E2U8 SMIM11P1-201ENST00000369586 178 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 SNORD116-11-201ENST00000383882 92 ntBASIC3.12□□□□□ -1.91
C4orf47A7E2U8 RNU6-701P-201ENST00000384059 107 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms