Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.45□□□□□ -2.34
RGPD3A6NKT7 MTCO2P2-201ENST00000591258 225 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 ELOCP5-201ENST00000604924 333 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 RNU1-58P-201ENST00000362413 163 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 U3.8-201ENST00000363675 217 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 MTCO1P56-201ENST00000401674 224 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 MIR1267-201ENST00000408723 78 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.45□□□□□ -2.34
RGPD3A6NKT7 AL035410.1-201ENST00000427409 427 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 HMGN3P1-201ENST00000453847 193 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 AC013267.1-201ENST00000458227 267 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 AC087477.1-201ENST00000465747 340 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 AC114982.1-201ENST00000469402 321 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 AL133373.1-201ENST00000497098 94 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 RNU6-488P-201ENST00000515918 99 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 CENPUP1-201ENST00000526649 1202 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.45□□□□□ -2.34
RGPD3A6NKT7 NACAP3-201ENST00000552100 481 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 AC012414.6-201ENST00000568241 401 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 AC021851.1-201ENST00000608537 1082 ntBASIC0.45□□□□□ -2.34
RGPD3A6NKT7 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.44□□□□□ -2.34
RGPD3A6NKT7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
RGPD3A6NKT7 SNORA2A-201ENST00000383885 135 ntBASIC0.44□□□□□ -2.34
RGPD3A6NKT7 SNORA25-201ENST00000384384 134 ntBASIC0.44□□□□□ -2.34
RGPD3A6NKT7 RNU6-360P-201ENST00000390944 104 ntBASIC0.44□□□□□ -2.34
RGPD3A6NKT7 RNU2-49P-201ENST00000410666 184 ntBASIC0.44□□□□□ -2.34
RGPD3A6NKT7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.44□□□□□ -2.34
RGPD3A6NKT7 BNIP3P16-201ENST00000589779 534 ntBASIC0.44□□□□□ -2.34
RGPD3A6NKT7 RNU6-251P-201ENST00000363235 104 ntBASIC0.43□□□□□ -2.34
RGPD3A6NKT7 RNU6-105P-201ENST00000363909 104 ntBASIC0.43□□□□□ -2.34
RGPD3A6NKT7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RGPD3A6NKT7 MIR10B-201ENST00000385011 110 ntBASIC0.43□□□□□ -2.34
RGPD3A6NKT7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
RGPD3A6NKT7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.43□□□□□ -2.34
RGPD3A6NKT7 HSPE1P13-201ENST00000451143 297 ntBASIC0.43□□□□□ -2.34
RGPD3A6NKT7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.43□□□□□ -2.34
RGPD3A6NKT7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.43□□□□□ -2.34
RGPD3A6NKT7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.43□□□□□ -2.34
RGPD3A6NKT7 uc_338.22-201ENST00000622722 187 ntBASIC0.43□□□□□ -2.34
RGPD3A6NKT7 SNORD33-201ENST00000362761 85 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 Z95118.1-201ENST00000421372 247 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 AC010099.3-201ENST00000423896 409 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 AL512844.2-201ENST00000433990 593 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.42□□□□□ -2.34
RGPD3A6NKT7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.42□□□□□ -2.34
RGPD3A6NKT7 AC090079.2-201ENST00000575289 768 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 ZNF663P-202ENST00000641770 1131 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 RNU6-441P-201ENST00000384545 106 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 Z99497.1-201ENST00000421282 135 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 Z82210.1-201ENST00000440037 231 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.42□□□□□ -2.34
RGPD3A6NKT7 LARP1BP2-201ENST00000486594 519 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 AC108729.1-201ENST00000487812 947 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 AC145146.1-201ENST00000496370 254 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.42□□□□□ -2.34
RGPD3A6NKT7 AP003066.2-201ENST00000529375 555 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 AC125611.1-201ENST00000549563 229 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 BNIP3P23-201ENST00000599655 511 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.42□□□□□ -2.34
RGPD3A6NKT7 RNU6-486P-201ENST00000363116 107 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 RNU6-414P-201ENST00000363705 104 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 Y_RNA.167-201ENST00000363735 109 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 RNU6-140P-201ENST00000384566 108 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 AL355615.1-201ENST00000406187 641 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 MIR1265-201ENST00000408444 86 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 FO393419.3-201ENST00000428741 282 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 AL606489.2-201ENST00000433886 234 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 TRBVB-201ENST00000477100 408 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 TRBVA-201ENST00000498804 316 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 AC113398.2-201ENST00000507630 558 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 AC025465.3-201ENST00000510570 311 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.41□□□□□ -2.34
RGPD3A6NKT7 AC009268.1-201ENST00000561352 1203 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.41□□□□□ -2.34
RGPD3A6NKT7 AC004775.1-201ENST00000607389 753 ntBASIC0.41□□□□□ -2.34
RGPD3A6NKT7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
RGPD3A6NKT7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC245102.2-201ENST00000448956 180 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 RPL36AP48-201ENST00000485521 314 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 SNORA31.17-201ENST00000516953 127 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AL590705.4-201ENST00000532209 134 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC023050.2-201ENST00000544968 387 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC021739.1-201ENST00000559631 174 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC023158.1-201ENST00000561632 1025 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC016542.1-201ENST00000608259 493 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AL021879.1-201ENST00000611756 288 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.4□□□□□ -2.35
RGPD3A6NKT7 Y_RNA.549-201ENST00000384657 102 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 RNU6-1151P-201ENST00000384684 107 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 RNA5SP501-201ENST00000410990 112 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 MTCO1P3-201ENST00000429327 192 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC098831.1-201ENST00000440661 216 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC010409.1-201ENST00000487382 476 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC022483.1-201ENST00000514020 567 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms