Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC068647.2-201ENST00000637380 353 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 MIR942-201ENST00000401111 86 ntBASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 AP001324.2-201ENST00000461163 319 ntBASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 AC023932.2-201ENST00000603176 175 ntBASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 AL583856.2-201ENST00000606298 543 ntBASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 AC100812.1-201ENST00000607622 580 ntBASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 FTX_3.1-201ENST00000610451 147 ntBASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 AC130324.3-201ENST00000614165 542 ntBASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.19□□□□□ -2.44
LINC01549A6NIU2 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 RNU6-707P-201ENST00000364647 95 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 RNA5SP247-201ENST00000411181 105 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 RPL22P18-201ENST00000417197 377 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 ZYG11AP1-201ENST00000430329 837 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 AC097499.1-201ENST00000444277 208 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 BUD31P2-201ENST00000449374 300 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 MIR4452-201ENST00000583004 71 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 uc_338.15-201ENST00000615470 191 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 AL132822.1-201ENST00000617063 513 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 MIR3199-2-201ENST00000636243 86 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 MIR371B-201ENST00000638082 66 ntBASIC-0.2□□□□□ -2.44
LINC01549A6NIU2 RNU6-112P-201ENST00000363599 104 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 RNU4-31P-201ENST00000384211 141 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 RNU2-48P-201ENST00000410694 191 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 SRIP3-201ENST00000413200 219 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 RNU6-1256P-201ENST00000516539 103 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 RNU6-405P-201ENST00000516637 110 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 RNU6-467P-201ENST00000517027 110 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 KC877982.1-201ENST00000602313 470 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 AC092354.1-201ENST00000606057 376 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 AC004775.1-201ENST00000607389 753 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 AC024257.5-201ENST00000612739 531 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 ATM-230ENST00000640388 578 ntTSL 5 BASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 AC092447.10-201ENST00000620607 1652 ntBASIC-0.21□□□□□ -2.44
LINC01549A6NIU2 Y_RNA.62-201ENST00000362840 99 ntBASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 RNU4-67P-201ENST00000364569 141 ntBASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 RNU6-360P-201ENST00000390944 104 ntBASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 RNU2-70P-201ENST00000410718 179 ntBASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 AL589872.1-201ENST00000426602 288 ntBASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 MTND5P14-201ENST00000441481 1267 ntBASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 SNORA62.5-201ENST00000516634 120 ntBASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 AC005261.5-201ENST00000596280 355 ntBASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 AC005021.1-201ENST00000608730 355 ntBASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 AC068205.3-201ENST00000636385 468 ntBASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 SLC10A5P1-201ENST00000379063 1306 ntBASIC-0.22□□□□□ -2.44
LINC01549A6NIU2 PCF11-AS1-201ENST00000602322 1516 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-37P-201ENST00000362692 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-11P-201ENST00000364234 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-1-201ENST00000383898 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-42P-201ENST00000384165 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-36P-201ENST00000384172 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-4P-201ENST00000384205 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-5P-201ENST00000384238 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-611P-201ENST00000384276 104 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-3P-201ENST00000384314 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-2-201ENST00000384627 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-9-201ENST00000384776 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-33P-201ENST00000384793 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AC127391.1-201ENST00000411737 98 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RPL26P6-201ENST00000440913 438 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms