Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC114781.4-201ENST00000513707 639 ntBASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 HMGB1P33-201ENST00000563485 527 ntBASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC025678.1-201ENST00000567861 338 ntBASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL627309.6-201ENST00000606857 840 ntBASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AF250324.2-201ENST00000608299 610 ntBASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC092954.2-201ENST00000609103 430 ntBASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 U4.5-201ENST00000617137 123 ntBASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 SCARNA15.3-201ENST00000626315 122 ntBASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 SCARNA4.1-201ENST00000628597 123 ntBASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL365361.1-201ENST00000566942 3481 ntBASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRBV5-4A0A0C4DH59 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL079305.1-201ENST00000623159 3008 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 Y_RNA.6-201ENST00000362350 114 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 Y_RNA.516-201ENST00000384541 124 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 RNU6-750P-201ENST00000390946 107 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL590002.1-201ENST00000406554 418 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 RNU2-49P-201ENST00000410666 184 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 RNU6-193P-201ENST00000410977 107 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 Y_RNA.623-201ENST00000411128 95 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL358075.3-201ENST00000426289 226 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 TRIAP1P1-201ENST00000427062 225 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC009414.1-201ENST00000427200 443 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL627311.1-201ENST00000431514 115 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC000111.3-201ENST00000433478 193 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 RPS15AP27-201ENST00000449183 343 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC093392.2-201ENST00000450682 337 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 BTF3P15-201ENST00000455606 336 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 RNU6-1178P-201ENST00000516674 107 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 HIF1AP1-201ENST00000553642 175 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC005951.1-201ENST00000576706 485 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC080078.2-201ENST00000603766 501 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC093788.1-201ENST00000609356 927 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 MIR6134-201ENST00000617606 109 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 UCA1.1-201ENST00000620952 75 ntBASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
TRBV5-4A0A0C4DH59 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 RNU6-715P-201ENST00000365204 103 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 Y_RNA.372-201ENST00000365599 102 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 Z98749.2-208ENST00000381646 500 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 SNORA69-201ENST00000383895 132 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 RNU6-45P-201ENST00000384471 107 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 MTCO1P21-201ENST00000416634 589 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL353621.1-201ENST00000418219 243 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC113155.1-201ENST00000511141 769 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 SNORD19.2-201ENST00000516978 73 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AL137161.1-201ENST00000532231 390 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC006199.1-201ENST00000548728 219 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 TPRKBP2-201ENST00000565969 475 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC007151.1-201ENST00000572774 483 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC008739.2-201ENST00000597006 317 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 RPL23AP78-201ENST00000599928 470 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 BNIP3P30-201ENST00000601184 574 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC025165.5-201ENST00000602802 578 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC087045.1-201ENST00000605856 382 ntBASIC2.34□□□□□ -2.03
TRBV5-4A0A0C4DH59 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms