Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 RNU6-250P-201ENST00000516958 103 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 RNU6-586P-201ENST00000517265 104 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 RPS3AP4-201ENST00000555161 764 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 BNIP3P25-201ENST00000596023 559 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 AC018638.7-201ENST00000605836 1114 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 MIR7974-201ENST00000615835 79 ntBASIC1.52□□□□□ -2.17
USH1CQ9Y6N9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 RNU6-858P-201ENST00000362436 107 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 MIR301A-201ENST00000385261 86 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 RNA5SP212-201ENST00000391223 107 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 FCF1P10-201ENST00000407590 479 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 AL358453.1-201ENST00000422522 250 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 RAC1P6-201ENST00000423911 575 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 RPS3AP22-201ENST00000488297 769 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 RNU6-991P-201ENST00000516168 107 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 AC010376.1-201ENST00000522101 334 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 GNAI2P1-201ENST00000541815 315 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 RNU6-88P-201ENST00000606801 100 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 AC097468.3-201ENST00000607956 456 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 AL391813.2-201ENST00000609113 322 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 MIR8081-201ENST00000611533 95 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 AC006386.1-201ENST00000619436 415 ntBASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
USH1CQ9Y6N9 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 MTND4P23-201ENST00000447723 1363 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 SNORD116.1-201ENST00000365628 92 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 RNU1-57P-201ENST00000384491 166 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 SNORA40C-201ENST00000391285 128 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 MIR1305-201ENST00000408300 86 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AC008267.5-201ENST00000424928 265 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 EEF1A1P39-201ENST00000440791 250 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 MTND1P3-201ENST00000484956 952 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AC010587.2-201ENST00000511727 448 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 Y_RNA.675-201ENST00000516389 149 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 CYCSP27-201ENST00000527643 293 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AC136619.2-201ENST00000563361 631 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AC073410.2-201ENST00000603240 332 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AC021646.1-201ENST00000605469 484 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AC093788.1-201ENST00000609356 927 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AL589994.2-201ENST00000621124 579 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 AC106858.1-201ENST00000637497 429 ntBASIC1.5□□□□□ -2.17
USH1CQ9Y6N9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 CISD1P1-201ENST00000393907 327 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 RNU6-1025P-201ENST00000410629 104 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 TXNL1P1-201ENST00000429528 554 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 VN1R108P-201ENST00000431580 830 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 RNA5SP57-201ENST00000459463 123 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AK6P1-201ENST00000540219 478 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 ARL2BPP2-201ENST00000550907 489 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AL160236.1-201ENST00000556317 195 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 MTCYBP23-201ENST00000558717 1102 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AC093249.1-201ENST00000567049 203 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 MIR4713-201ENST00000582691 75 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AL670379.6-201ENST00000603753 252 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AL670379.11-201ENST00000604059 253 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AC008162.1-201ENST00000604718 254 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AL670379.1-201ENST00000604752 252 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AL670379.5-201ENST00000605253 252 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AL670379.12-201ENST00000605291 253 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AL670379.8-201ENST00000605353 252 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AL670379.7-201ENST00000605823 252 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AC072039.2-201ENST00000608883 439 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms