Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RNU6-130P-201ENST00000411112 103 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 AL592148.1-201ENST00000413568 445 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 AC096920.1-201ENST00000423991 241 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 HMGB1P37-201ENST00000439613 609 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 AC013470.1-201ENST00000453438 462 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 FABP5P15-201ENST00000453566 214 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 AC067942.3-201ENST00000512025 362 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-570P-201ENST00000517051 105 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 AC002545.1-201ENST00000592511 181 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 AC009318.2-201ENST00000610917 651 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 SCARNA15.3-201ENST00000626315 122 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 SCARNA4.1-201ENST00000628597 123 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 Y_RNA.84-201ENST00000363011 104 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 Y_RNA.105-201ENST00000363182 111 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-173P-201ENST00000364215 104 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-512P-201ENST00000364438 103 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-1025P-201ENST00000410629 104 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 AC087650.1-201ENST00000431445 468 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 AL392103.1-201ENST00000447000 198 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 RN7SKP210-201ENST00000459176 261 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 SCARNA15.2-201ENST00000516409 127 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 AL512605.2-201ENST00000592972 256 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 AL645944.1-201ENST00000603857 493 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 FTX_2.1-201ENST00000618816 94 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 AL360181.4-201ENST00000621752 134 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 Z75746.1-201ENST00000440243 2080 ntBASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HCFC2Q9Y5Z7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-37P-201ENST00000362692 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 SNORD50.1-201ENST00000362987 71 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 SNORD81.1-201ENST00000363064 77 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-11P-201ENST00000364234 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 SNORD14B-201ENST00000364533 90 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-7-201ENST00000364784 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 U3.13-201ENST00000364804 214 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-8-201ENST00000365467 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-25P-201ENST00000383873 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-1-201ENST00000383898 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-48P-201ENST00000384161 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-36P-201ENST00000384172 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-4P-201ENST00000384205 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-5P-201ENST00000384238 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-3P-201ENST00000384314 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-16P-201ENST00000384385 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-15P-201ENST00000384534 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-2-201ENST00000384627 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-29P-201ENST00000384637 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-9-201ENST00000384776 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 MIR490-201ENST00000384865 128 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 MIR521-1-201ENST00000384902 87 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 PIGPP3-201ENST00000425307 415 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 SDAD1P3-201ENST00000427380 333 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 HIGD1AP2-201ENST00000446367 280 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 AC079354.2-201ENST00000453523 154 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 HMGB1P35-201ENST00000503360 598 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 MIR2355-201ENST00000517199 87 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 SNORA81.3-201ENST00000517283 198 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 AL590705.4-201ENST00000532209 134 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 AC007458.1-201ENST00000542812 373 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 AL137100.2-201ENST00000555786 315 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 MIR3921-201ENST00000577308 85 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-6P-201ENST00000606623 107 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 AC137590.2-201ENST00000619709 240 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 AL773545.4-201ENST00000637262 310 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms