Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 PDCL2P1-201ENST00000419302 352 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AL160275.3-201ENST00000423876 471 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 TAAR7P-201ENST00000436141 242 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 RPL39P40-201ENST00000445481 146 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AC104058.1-201ENST00000448028 297 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 RPS15AP27-201ENST00000449183 343 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 SCARNA18-201ENST00000459004 134 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AL049873.1-201ENST00000480540 376 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 RNU6-1038P-201ENST00000516516 104 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 RNA5SP367-201ENST00000516557 118 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 MTND4P7-201ENST00000523876 130 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 OR11H5P-201ENST00000554039 926 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 PSMA3P-201ENST00000555485 635 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 MTCO3P23-201ENST00000561363 289 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 RPL23AP78-201ENST00000599928 470 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AL158032.1-201ENST00000605401 106 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AL136221.1-201ENST00000621449 509 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 FAM35BP-202ENST00000497389 3337 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 RNU6-845P-201ENST00000362578 103 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 RNU6-512P-201ENST00000364438 103 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 SNORA16.2-201ENST00000390991 127 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 RNU2-41P-201ENST00000410991 178 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 HMGN2P30-201ENST00000423237 256 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AL590383.1-201ENST00000428602 75 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AL591704.1-201ENST00000432574 275 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AC046134.1-201ENST00000514454 666 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 RNU6-1314P-201ENST00000517139 104 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AC107953.1-201ENST00000522216 297 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AC002545.1-201ENST00000592511 181 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AL138889.2-201ENST00000603883 242 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AL357078.3-201ENST00000607528 618 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 AC121333.1-201ENST00000567488 2709 ntBASIC3.04□□□□□ -1.92
SNX9Q9Y5X1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 MTND4P35-201ENST00000604257 1375 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AC010680.1-201ENST00000590024 3590 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 RNU6-767P-201ENST00000384132 107 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 MIR512-1-201ENST00000384913 84 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 SNORD37.1-201ENST00000390968 65 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 RNU2-33P-201ENST00000410344 192 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AL592148.1-201ENST00000413568 445 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AL513185.2-201ENST00000425543 193 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 MTCO3P46-201ENST00000425787 232 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AL356867.1-201ENST00000429623 299 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AC087499.2-201ENST00000432861 149 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 FABP5P15-201ENST00000453566 214 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 RNU6-1208P-201ENST00000459588 107 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 FAM206BP-201ENST00000510179 541 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AC091826.1-201ENST00000514065 313 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 CASP1P1-201ENST00000526345 212 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AC011712.1-201ENST00000588959 234 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 BNIP3P25-201ENST00000596023 559 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 C8orf59P2-201ENST00000603441 271 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AC092807.2-201ENST00000609367 243 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AP003400.5-201ENST00000624827 617 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 MIR6733-201ENST00000635723 61 ntBASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX9Q9Y5X1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
SNX9Q9Y5X1 MTND4P12-201ENST00000498999 1377 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms