Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 RPL23AP49-201ENST00000492925 468 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 MTCYBP40-201ENST00000509390 1135 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 RN7SKP18-201ENST00000516005 275 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 SCARNA14-201ENST00000516903 136 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AC005476.1-201ENST00000554427 397 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AL121821.2-201ENST00000556081 394 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AC025281.1-201ENST00000567026 265 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AC009314.1-201ENST00000603871 304 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 CYP2C61P-201ENST00000604072 290 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AL442067.2-201ENST00000614033 363 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AL160413.1-201ENST00000622780 310 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AC091953.5-201ENST00000622919 233 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 MAPK10-373ENST00000641983 6772 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 MTND4P23-201ENST00000447723 1363 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-942P-201ENST00000363002 107 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU1-18P-201ENST00000363062 164 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 MIR491-201ENST00000384877 84 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 MIR199A2-201ENST00000385289 110 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AL161651.1-201ENST00000440882 223 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 Y_RNA.653-201ENST00000459091 95 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 ACA59.1-201ENST00000515966 143 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-1170P-201ENST00000515974 106 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 SNORA74D-201ENST00000516404 141 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 Y_RNA.718-201ENST00000517110 102 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 SNORA70.24-201ENST00000517233 118 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 TRAV32-201ENST00000553993 340 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AC005899.2-201ENST00000584353 90 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AC018462.2-201ENST00000605375 395 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AL133255.1-201ENST00000606374 441 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AL050343.2-201ENST00000607338 280 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AL133215.3-201ENST00000609801 448 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AC092628.2-201ENST00000622492 339 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 U6.105-201ENST00000637379 88 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AC006026.1-201ENST00000444025 1803 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 AC007496.3-201ENST00000624987 3443 ntBASIC3.56□□□□□ -1.84
PCDHGA9Q9Y5G4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 MTND5P1-201ENST00000445440 1375 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 Y_RNA.813-201ENST00000364639 102 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-596P-201ENST00000365395 98 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 MIR517A-201ENST00000385001 87 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 RNY4P36-201ENST00000391116 96 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-325P-201ENST00000411132 105 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 AP000907.1-201ENST00000428428 510 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU7-187P-201ENST00000458985 68 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 AC133134.1-201ENST00000466800 359 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 AC008571.1-201ENST00000467232 300 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 AC009163.5-201ENST00000575421 637 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 CPDP1-201ENST00000579660 283 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 BNIP3P16-201ENST00000589779 534 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 AC005046.1-201ENST00000608515 625 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 AL157817.1-201ENST00000614264 790 ntBASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDHGA9Q9Y5G4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AL049781.1-201ENST00000623195 3585 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-858P-201ENST00000362436 107 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 Y_RNA.151-201ENST00000363566 112 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 RNA5SP139-201ENST00000364340 117 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms