Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SNORA43.2-201ENST00000516652 128 ntBASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 SCARNA3-201ENST00000517097 143 ntBASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 AC109329.2-201ENST00000519658 482 ntBASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 CENPUP1-201ENST00000526649 1202 ntBASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 AK6P1-201ENST00000540219 478 ntBASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 AC023050.3-201ENST00000541142 333 ntBASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 OR1M4P-201ENST00000589199 287 ntBASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 AC008121.1-201ENST00000603244 268 ntBASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 RPL23AP88-201ENST00000605759 454 ntBASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 AC011890.2-201ENST00000613393 294 ntBASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.14□□□□□ -1.91
PCDHGB3Q9Y5G1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 MTND4P27-201ENST00000450813 1354 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 MIR148B-201ENST00000362252 99 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-266P-201ENST00000364225 107 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 Y_RNA.450-201ENST00000384198 113 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 MIR490-201ENST00000384865 128 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 MIR483-201ENST00000385070 76 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 SNORD17-201ENST00000390930 237 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-908P-201ENST00000410160 94 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 RPLP0P7-201ENST00000416050 667 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 AL121601.2-201ENST00000438019 707 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 AC124916.1-201ENST00000444020 547 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 AP001324.2-201ENST00000461163 319 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 AC133134.1-201ENST00000466800 359 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 DYNLL1P5-201ENST00000467158 270 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 Y_RNA.654-201ENST00000497848 106 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU6-189P-201ENST00000516120 101 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 SNORA31.6-201ENST00000516241 130 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 SNORA70.24-201ENST00000517233 118 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 BTF3P12-201ENST00000519620 469 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 COPS8P3-201ENST00000526024 482 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 AC079598.5-201ENST00000547460 117 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 AC090115.3-201ENST00000553218 849 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 OR11H5P-201ENST00000554039 926 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 VN1R107P-201ENST00000601784 209 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 AL161756.2-201ENST00000604597 246 ntBASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGB3Q9Y5G1 OR4G1P-203ENST00000641984 1631 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 RNU4-35P-201ENST00000362588 141 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 RNY3P3-201ENST00000363816 102 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 Y_RNA.231-201ENST00000364358 102 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 SET-203ENST00000372688 801 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 RPL19P1-201ENST00000411635 428 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 EIF1P1-201ENST00000421436 341 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 BX276092.3-201ENST00000424182 230 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 UBBP3-201ENST00000445497 241 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 RPL21P10-201ENST00000463521 490 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 RPL7P43-201ENST00000478876 753 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 RPL21P99-201ENST00000480369 423 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 RPL36AP48-201ENST00000485521 314 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 SNORA25.17-201ENST00000517184 124 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 RN7SKP40-201ENST00000517211 242 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 IGKV2-26-201ENST00000518305 343 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AC010186.2-204ENST00000537668 439 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 HSPE1P20-201ENST00000538133 289 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 MIR5583-1-201ENST00000580941 59 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AL356280.1-201ENST00000603614 379 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AC021646.1-201ENST00000605469 484 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AL021997.1-201ENST00000605757 193 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 uc_338.1-201ENST00000612113 180 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AC090517.2-201ENST00000614966 680 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AC103705.1-201ENST00000619013 241 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 U4.7-201ENST00000638126 106 ntBASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
PCDHGB3Q9Y5G1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms