Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 RNU6-1069P-201ENST00000516612 133 ntBASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 AC105029.1-201ENST00000520250 669 ntBASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 CYCSP27-201ENST00000527643 293 ntBASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 AP000889.1-201ENST00000530968 660 ntBASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 MIR4506-201ENST00000584693 77 ntBASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 AC012119.1-201ENST00000603184 222 ntBASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 AC093732.2-201ENST00000607950 274 ntBASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 AL132765.2-201ENST00000610812 351 ntBASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 RMST_4.1-201ENST00000616886 107 ntBASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 TPTEP1-208ENST00000636884 213 ntBASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 CUL1P1-201ENST00000509510 2425 ntBASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PCDHB2Q9Y5E7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 RNU6-254P-201ENST00000363377 107 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 SNORA71.1-201ENST00000364523 117 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 Y_RNA.509-201ENST00000384506 99 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 Y_RNA.529-201ENST00000384586 119 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 MIR325-201ENST00000385260 98 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AL031121.1-201ENST00000406553 254 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 RN7SKP123-201ENST00000410732 291 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 RPL21P90-201ENST00000415692 466 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 TMEM167AP1-201ENST00000423409 219 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AL512844.2-201ENST00000433990 593 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AC092573.2-201ENST00000434546 243 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 RNA5SP310-201ENST00000459084 116 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 SNORA59A-201ENST00000459326 152 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 SNORA19.2-201ENST00000516013 114 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AP000889.2-201ENST00000532684 490 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 H3F3AP1-201ENST00000559984 334 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AC005498.1-201ENST00000592125 465 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AL133393.1-201ENST00000603277 287 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 AC027309.3-201ENST00000623419 351 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PCDHB2Q9Y5E7 Y_RNA.11-201ENST00000362375 109 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 Y_RNA.33-201ENST00000362591 102 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 Y_RNA.184-201ENST00000363884 108 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 SNORA75B-201ENST00000384053 137 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 RNU6-217P-201ENST00000384164 104 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 RNU6-1013P-201ENST00000384180 107 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 SNORD67-201ENST00000390833 111 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 RPS12P18-201ENST00000442381 270 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 AC092001.1-201ENST00000453012 261 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 RN7SL283P-201ENST00000489055 303 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 SNORA25.17-201ENST00000517184 124 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 AC026464.5-201ENST00000562497 722 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 DUSP12P1-201ENST00000612874 516 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 FAM157A-202ENST00000615155 405 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 AC112487.2-201ENST00000637950 304 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 AC073544.1-201ENST00000600110 1595 ntBASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHB2Q9Y5E7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 U3.6-201ENST00000363622 211 ntBASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 SNORA80A-201ENST00000363922 136 ntBASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 FAT1P1-201ENST00000406588 507 ntBASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 RNU2-3P-201ENST00000410144 191 ntBASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 SNRPEP4-201ENST00000435815 279 ntBASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 HMGB1P18-201ENST00000438801 619 ntBASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 NDUFB1P2-201ENST00000449477 176 ntBASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 CECR9-201ENST00000453421 199 ntBASIC3.35□□□□□ -1.87
PCDHB2Q9Y5E7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms