Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 SNORD109B-201ENST00000458961 67 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 SNORD109A-201ENST00000459128 67 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AC093259.1-201ENST00000509755 300 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 RNU2-10P-201ENST00000516375 211 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 ARL2BPP2-201ENST00000550907 489 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AL354943.1-201ENST00000572103 781 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AC137800.2-201ENST00000574375 120 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 MIR3146-201ENST00000580367 79 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 MIR5002-201ENST00000584713 97 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 PRR13P7-201ENST00000605538 430 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AC091834.1-201ENST00000614543 472 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AL138955.1-201ENST00000622881 1040 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AC008993.2-201ENST00000631744 806 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AC093591.3-201ENST00000634516 308 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 SNORD3E-201ENST00000362899 217 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 RNU6-946P-201ENST00000383878 107 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 UBE2V1P2-201ENST00000397758 440 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 RNA5SP100-201ENST00000410903 110 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 RNA5SP59-201ENST00000410922 110 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 RNU4-22P-201ENST00000411058 166 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 RPL23AP39-201ENST00000415533 405 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 RPS3AP37-201ENST00000419176 745 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 TOMM20P4-201ENST00000427861 435 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AC105272.1-201ENST00000438604 198 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 USP9YP8-201ENST00000441913 500 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AC118469.1-201ENST00000442943 488 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AL590365.1-201ENST00000450788 243 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 snoU109.2-201ENST00000459316 135 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AC023050.2-201ENST00000544968 387 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 VN1R90P-201ENST00000595717 726 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AL033523.1-201ENST00000605153 153 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AC093732.2-201ENST00000607950 274 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 uc_338.12-201ENST00000616344 181 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 AP002371.2-201ENST00000624450 503 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
CHTOPQ9Y3Y2 snoU2_19.1-201ENST00000362361 80 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 RNU6-942P-201ENST00000363002 107 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 MIR10A-201ENST00000385043 110 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AC068050.1-201ENST00000394891 380 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 Z92545.1-201ENST00000411782 234 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AC092809.3-201ENST00000415453 231 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 CR769776.1-201ENST00000441254 787 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AL591719.1-201ENST00000444669 744 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 RPL30P6-201ENST00000475925 342 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AC234781.5-201ENST00000508429 271 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 RNU6-991P-201ENST00000516168 107 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AC011979.2-201ENST00000527568 352 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AL049838.1-201ENST00000563647 981 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AC002400.1-201ENST00000569310 726 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AC007621.1-201ENST00000604544 437 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AL592221.1-201ENST00000605266 382 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 AC009159.1-201ENST00000618386 642 ntBASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CHTOPQ9Y3Y2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 RNU6-414P-201ENST00000363705 104 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 XGY1-201ENST00000381172 446 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 MIR483-201ENST00000385070 76 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AC107081.1-201ENST00000414975 361 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AC018634.1-201ENST00000437554 401 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 PPP1R2P5-201ENST00000457256 603 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AC005908.1-201ENST00000468701 347 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 YWHAEP4-201ENST00000505390 198 ntBASIC1.48□□□□□ -2.17
CHTOPQ9Y3Y2 AC119751.4-201ENST00000507498 357 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms