Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 MIR5007-201ENST00000583098 95 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AC073410.2-201ENST00000603240 332 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AC006023.1-201ENST00000603944 259 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 NDUFA8P1-201ENST00000605525 367 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AL121992.2-201ENST00000606262 256 ntBASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-179P-201ENST00000363350 107 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-371P-201ENST00000364283 108 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 RNU1-91P-201ENST00000364746 163 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 RNA5SP138-201ENST00000365098 114 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-1140P-201ENST00000410517 106 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC005005.2-201ENST00000420779 380 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 CYCSP46-201ENST00000423569 204 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC063976.3-201ENST00000426849 329 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 MTATP6P16-201ENST00000434543 526 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC073614.1-201ENST00000438690 650 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 ART2BP-201ENST00000453501 499 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AP001025.1-201ENST00000486139 332 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 RPL23AP49-201ENST00000492925 468 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC116562.3-201ENST00000506136 177 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 Y_RNA.687-201ENST00000516558 91 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 MTCYBP20-201ENST00000524239 1129 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC068587.5-201ENST00000528506 175 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 MIR3915-201ENST00000578518 97 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 MIR3682-201ENST00000581338 84 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC090578.1-201ENST00000604955 591 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC098614.4-201ENST00000607601 462 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AL133173.2-201ENST00000614270 90 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC008121.3-201ENST00000618726 433 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC008993.2-201ENST00000631744 806 ntBASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.86□□□□□ -2.11
KCNIP3Q9Y2W7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 OR4G2P-201ENST00000328113 903 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 SNORA71.3-201ENST00000362582 128 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 RNU4-21P-201ENST00000362802 126 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 SNORA67.4-201ENST00000384688 142 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 MIR196B-201ENST00000384852 84 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 MIR186-201ENST00000384988 86 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 SNORA48.3-201ENST00000391081 134 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AL591034.2-201ENST00000402839 359 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 HMGN1P14-201ENST00000412459 517 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 UBE2V1P10-201ENST00000414685 269 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC138623.1-201ENST00000418060 216 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 MTCO3P5-201ENST00000433620 714 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC009961.2-201ENST00000435771 251 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC012308.1-201ENST00000451232 178 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC011825.1-201ENST00000484967 388 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC018868.1-201ENST00000491307 315 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 RNU1-86P-201ENST00000516108 154 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 RNU1-107P-201ENST00000516617 154 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 SNORA31.23-201ENST00000517219 133 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AP003072.2-201ENST00000527756 676 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AP001646.1-201ENST00000527936 915 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 RANP3-201ENST00000530970 276 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 RPL30P11-203ENST00000598995 310 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC087683.2-201ENST00000611384 326 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AL731566.2-201ENST00000618971 317 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AC093648.1-201ENST00000623546 606 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AL359740.1-201ENST00000624340 592 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 AL137790.1-201ENST00000634283 177 ntBASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-525P-201ENST00000363685 104 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 SNORA25B-201ENST00000365507 128 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 SNORD116-20-201ENST00000384529 92 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 MIR518C-201ENST00000384822 101 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 MIR561-201ENST00000385216 97 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 RNU2-52P-201ENST00000410680 190 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 RNA5SP111-201ENST00000411386 101 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AL030996.1-201ENST00000411430 235 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms