Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 AC012671.1-201ENST00000451912 203 ntBASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 SNORA59A-201ENST00000459326 152 ntBASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 RNA5SP291-201ENST00000517222 105 ntBASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 IGKV2-38-201ENST00000517443 247 ntBASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 H3F3AP1-201ENST00000559984 334 ntBASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 AP001485.1-201ENST00000604799 199 ntBASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 SCARNA4-201ENST00000629045 128 ntBASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 U6.99-201ENST00000637524 83 ntBASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZC3H4Q9UPT8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 RNY1P5-201ENST00000383890 115 ntBASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 RNU2-68P-201ENST00000410878 191 ntBASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 AL157831.1-201ENST00000426134 473 ntBASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 AL356867.1-201ENST00000429623 299 ntBASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 RPL23AP75-201ENST00000491601 451 ntBASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 MTND5P41-201ENST00000517498 206 ntBASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 MIR3200-201ENST00000580767 85 ntBASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 AC073346.2-201ENST00000624724 2058 ntBASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ZC3H4Q9UPT8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 AL022322.2-201ENST00000624072 20397 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 AC135776.4-201ENST00000624300 1904 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNA5SP361-201ENST00000362686 118 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNA5SP124-201ENST00000362739 110 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNU6-923P-201ENST00000364753 107 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNU6-17P-201ENST00000384245 107 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNU6-318P-201ENST00000384283 103 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNU6-1035P-201ENST00000384477 107 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNU6-18P-201ENST00000384527 107 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNU6-541P-201ENST00000384709 110 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 PTMAP5-201ENST00000393073 333 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RPS4XP3-201ENST00000398541 413 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 SNORD12B-201ENST00000410433 91 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 AP000870.1-201ENST00000472927 406 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RPL31P13-201ENST00000484151 370 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 AC110768.1-201ENST00000509222 400 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNU7-200P-201ENST00000516105 62 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNA5SP249-201ENST00000516127 99 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 RNU6-1073P-201ENST00000517182 106 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 AC026403.1-201ENST00000518938 295 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 CYCSP40-201ENST00000575927 294 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 MIR3921-201ENST00000577308 85 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 BX322639.1-202ENST00000423987 2213 ntBASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.28□□□□□ -1.56
ZC3H4Q9UPT8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.383-201ENST00000383855 97 ntBASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 RNU6-72P-201ENST00000384285 79 ntBASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 MIR34B-201ENST00000385076 84 ntBASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 SNORD96B-201ENST00000386148 79 ntBASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 AL592291.1-201ENST00000403830 352 ntBASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 RNU5A-5P-201ENST00000411054 116 ntBASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 AC010285.1-201ENST00000470580 392 ntBASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 SNORA70.24-201ENST00000517233 118 ntBASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 AC027288.2-201ENST00000553028 243 ntBASIC5.27□□□□□ -1.57
ZC3H4Q9UPT8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms