Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 POLR2KP2-201ENST00000438155 177 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 HIGD1AP2-201ENST00000446367 280 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 IFNWP4-201ENST00000453148 294 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 RPL21P13-201ENST00000488305 481 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 AC108022.1-201ENST00000493466 478 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 COX7A2P2-201ENST00000505291 250 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 RNU6-677P-201ENST00000516914 101 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 KLKP1-201ENST00000595979 403 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 AC009314.1-201ENST00000603871 304 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 U3.6-201ENST00000363622 211 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 AL451062.2-201ENST00000427515 271 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 Z82210.1-201ENST00000440037 231 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 RPL23AP3-201ENST00000453844 468 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 U8.21-201ENST00000459536 136 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 AC008481.1-201ENST00000463278 396 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 AC092991.1-201ENST00000477176 376 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 RPL26P26-201ENST00000480251 434 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 RN7SKP60-201ENST00000516985 239 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 AC100770.1-201ENST00000532310 322 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 NACAP3-201ENST00000552100 481 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 AC113403.1-201ENST00000604910 193 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 U7.2-201ENST00000607576 63 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 AL161912.2-201ENST00000565707 3007 ntBASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDZRN3Q9UPQ7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 SPRR2C-201ENST00000290702 219 ntBASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 RNU1-132P-201ENST00000364300 164 ntBASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 SNORD82-201ENST00000365530 70 ntBASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 RPS4XP3-201ENST00000398541 413 ntBASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 RPS26P56-201ENST00000444468 240 ntBASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 AC104057.1-201ENST00000515547 497 ntBASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 RNU2-56P-201ENST00000516826 190 ntBASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 CPHL1P-201ENST00000461341 3407 ntBASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDZRN3Q9UPQ7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 RNU6-222P-201ENST00000362438 107 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 RNU6-905P-201ENST00000384434 107 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 RNU6-14P-201ENST00000384630 106 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 Y_RNA.558-201ENST00000384685 113 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 MIR92A2-201ENST00000385299 75 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 RN7SKP202-201ENST00000410439 330 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 RNU2-15P-201ENST00000410692 191 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 RPS15AP40-201ENST00000419621 391 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 AC016700.2-201ENST00000446011 156 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 TOMM22P6-201ENST00000465035 409 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 AC117440.1-201ENST00000474107 571 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 SNORA67.7-201ENST00000516664 135 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 AP001328.1-201ENST00000528550 176 ntBASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.61□□□□□ -1.51
PDZRN3Q9UPQ7 MIR4716-201ENST00000579628 84 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms