Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 ANP32BP2-201ENST00000454525 545 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 AC098869.1-201ENST00000481627 292 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 RN7SL323P-201ENST00000494712 295 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 HMGB3P17-201ENST00000504195 649 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 AC067942.3-201ENST00000512025 362 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 FTH1P9-201ENST00000513251 355 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 RNU6-377P-201ENST00000515965 102 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 SCARNA14-201ENST00000516903 136 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 RNA5SP291-201ENST00000517222 105 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 AC091144.1-201ENST00000519573 138 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 AL354798.1-201ENST00000622505 329 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 AC090617.7-201ENST00000623952 126 ntBASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHA4Q9UN74 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHA4Q9UN74 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHA4Q9UN74 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 RN7SKP280-201ENST00000364196 304 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 SNORA12.2-201ENST00000391040 156 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 RPS29P13-201ENST00000402041 169 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 MIR1193-201ENST00000408109 78 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 RNU2-25P-201ENST00000411041 191 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 AL500522.2-201ENST00000448562 343 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 HMGB1P35-201ENST00000503360 598 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 RNU6-111P-201ENST00000517179 105 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 AC007458.1-201ENST00000542812 373 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 TRAV28-201ENST00000557548 323 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 AC104581.2-201ENST00000572227 430 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 U4.7-201ENST00000638126 106 ntBASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHA4Q9UN74 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.20-201ENST00000362479 113 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.84-201ENST00000363011 104 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 U3.13-201ENST00000364804 214 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 RNU5E-7P-201ENST00000365290 117 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 SNORA57.1-201ENST00000391227 145 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 SNORA3.3-201ENST00000408712 125 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 RNU6-1203P-201ENST00000410703 110 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 RNU2-68P-201ENST00000410878 191 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 AL590135.1-201ENST00000422215 156 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 AL590383.1-201ENST00000428602 75 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 RPS29P7-201ENST00000439662 171 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 AL356535.1-201ENST00000440335 398 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 AL451050.1-201ENST00000450126 415 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 AC010469.2-201ENST00000496412 480 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 RAC1P2-201ENST00000511164 579 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 CYCSP30-201ENST00000546447 172 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 AL442163.3-201ENST00000554110 156 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 AP001282.2-201ENST00000616149 309 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 MIR4727-201ENST00000622232 55 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 AC018555.1-201ENST00000567548 1980 ntBASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHA4Q9UN74 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 AC010733.2-201ENST00000589496 5702 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.117-201ENST00000363294 101 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 RNU6-200P-201ENST00000364743 107 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 RNU6-336P-201ENST00000364891 107 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.358-201ENST00000365491 99 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.405-201ENST00000383979 100 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.416-201ENST00000384014 113 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.451-201ENST00000384200 100 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.524-201ENST00000384564 100 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.561-201ENST00000384694 100 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 MIR30B-201ENST00000384850 88 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 HLFP1-201ENST00000402375 499 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 MIR548H3-201ENST00000408771 118 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 RPL17P36-201ENST00000420302 549 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 AC098614.2-201ENST00000426040 255 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 SDAD1P3-201ENST00000427380 333 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 MTND2P29-201ENST00000438595 412 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 SNORA71B-202ENST00000439232 272 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms