Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 MTCO2P24-201ENST00000515611 426 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 RNU6-475P-201ENST00000516073 104 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 RN7SKP289-201ENST00000517244 295 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 CBX3P8-201ENST00000532412 525 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 ZNF192P1-203ENST00000565888 810 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 CPDP1-201ENST00000579660 283 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 MIR4513-201ENST00000581077 86 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 AL121655.1-201ENST00000605811 308 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 AL158196.1-201ENST00000616786 434 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 AL138825.1-201ENST00000618587 192 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 AC027309.3-201ENST00000623419 351 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 U6.99-201ENST00000637524 83 ntBASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.37□□□□□ -1.71
ZNRF3Q9ULT6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 Y_RNA.48-201ENST00000362710 103 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 RNU6-140P-201ENST00000384566 108 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 Y_RNA.577-201ENST00000384794 101 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 AL591034.2-201ENST00000402839 359 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 NDUFB4P6-201ENST00000436819 366 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 HMGN2P13-201ENST00000476476 274 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 FO393415.2-201ENST00000480085 343 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 AC022447.4-201ENST00000504053 364 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 AC105758.1-201ENST00000506038 399 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 COX6CP5-201ENST00000527162 228 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 HSBP1P1-201ENST00000555205 166 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 AC012603.1-201ENST00000606424 528 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 AC010205.1-201ENST00000616668 449 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 AL606534.2-204ENST00000635008 178 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.36□□□□□ -1.71
ZNRF3Q9ULT6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 MIR448-201ENST00000362131 111 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 RNY1P16-201ENST00000363063 111 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 SNORD74.4-201ENST00000364129 80 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 RNU6-99P-201ENST00000364721 107 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 U8.8-201ENST00000365399 135 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 Y_RNA.424-201ENST00000384063 103 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 AL117339.3-201ENST00000418733 162 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 DPH3P2-201ENST00000422618 250 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 AC092573.2-201ENST00000434546 243 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 U3.44-201ENST00000458938 192 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 AC103996.1-201ENST00000555468 102 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 MIR4782-201ENST00000577987 79 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 MIR3149-201ENST00000584629 83 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNRF3Q9ULT6 AC118273.1-201ENST00000525324 3006 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 IPO8P1-201ENST00000455509 3109 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 Y_RNA.176-201ENST00000363815 109 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 RNU5E-7P-201ENST00000365290 117 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 Y_RNA.401-201ENST00000383965 117 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 AC093663.1-201ENST00000497190 394 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 AC025445.1-201ENST00000502728 300 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 FTH1P9-201ENST00000513251 355 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 RNU7-4P-201ENST00000516961 62 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 OR5D17P-201ENST00000531492 978 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 AP002404.1-201ENST00000532005 451 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 AC004817.2-201ENST00000561794 651 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 AC113195.1-201ENST00000579952 141 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 AL139395.1-201ENST00000603662 160 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 AL355598.1-201ENST00000604169 202 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 MIR6852-201ENST00000621699 66 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 SCARNA4-202ENST00000625402 129 ntBASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.34□□□□□ -1.71
ZNRF3Q9ULT6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ZNRF3Q9ULT6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms