Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 RNU6-111P-201ENST00000517179 105 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 RN7SKP40-201ENST00000517211 242 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 AP003385.6-201ENST00000531603 374 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 AC005951.2-201ENST00000576282 495 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 MIR3158-1-201ENST00000583596 81 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 OR1M4P-201ENST00000589199 287 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 AC137590.2-201ENST00000619709 240 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 SNORD39.4-201ENST00000620099 78 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 U2.22-201ENST00000636441 106 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 AL161912.2-201ENST00000565707 3007 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 MTND5P6-201ENST00000422338 1798 ntBASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.51□□□□□ -1.85
PACSIN3Q9UKS6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 OR56A5-201ENST00000340110 738 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 Y_RNA.105-201ENST00000363182 111 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-1155P-201ENST00000363554 107 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 Y_RNA.276-201ENST00000364732 109 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 SNORA51.11-201ENST00000384442 131 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 Y_RNA.551-201ENST00000384661 102 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 Y_RNA.562-201ENST00000384695 113 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 CYCSP33-201ENST00000414485 327 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 AL137014.1-201ENST00000420490 1226 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 RPS3AP46-201ENST00000448352 682 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 snoU13.3-201ENST00000459441 104 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 RPL37P6-201ENST00000460682 294 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 RN7SL323P-201ENST00000494712 295 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 SNORA67.7-201ENST00000516664 135 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-914P-201ENST00000516749 109 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 AC007991.1-201ENST00000522680 631 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 SNRPGP16-201ENST00000533275 226 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 AC126177.3-201ENST00000551839 688 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 MIR4429-201ENST00000580105 73 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 MIR4273-201ENST00000582824 84 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 AC012433.1-201ENST00000588916 398 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 AC244505.7-201ENST00000599675 272 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 MIR3976-201ENST00000606807 139 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 SDR42E1P2-201ENST00000614861 481 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 U73479.1-201ENST00000618062 168 ntBASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PACSIN3Q9UKS6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-596P-201ENST00000365395 98 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 U3.15-201ENST00000365398 212 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 Y_RNA.515-201ENST00000384535 112 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 RNA5SP424-201ENST00000390988 115 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-325P-201ENST00000411132 105 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 AL445584.1-201ENST00000431451 330 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 PRDX3P3-201ENST00000447765 522 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 AL133547.1-201ENST00000448546 220 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-953P-201ENST00000459154 107 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 HMGN2P13-201ENST00000476476 274 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 RPL31P60-201ENST00000478450 367 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 AC093852.1-201ENST00000503587 266 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 SNORA31.22-201ENST00000517204 135 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 AC069113.1-201ENST00000517763 267 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 TGIF1P1-201ENST00000558095 802 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 AL158827.2-201ENST00000602494 330 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 AL591516.1-201ENST00000611326 274 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 AC005344.1-201ENST00000613391 459 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 SDR42E1P4-201ENST00000620894 481 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 AL691447.3-201ENST00000635020 330 ntBASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.49□□□□□ -1.85
PACSIN3Q9UKS6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PACSIN3Q9UKS6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PACSIN3Q9UKS6 RNU6-1249P-201ENST00000363237 111 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms