Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL355596.1-201ENST00000565399 3996 ntBASIC3.23□□□□□ -1.89
HDAC6Q9UBN7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 RNU4-66P-201ENST00000365199 138 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 Y_RNA.399-201ENST00000383955 105 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 MIR514A2-201ENST00000385131 88 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 MIR514A3-201ENST00000385132 88 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 BMS1P22-201ENST00000414726 313 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AL139413.1-201ENST00000421309 217 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 SRIP2-201ENST00000428470 166 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 ERLEC1P1-201ENST00000433806 578 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AL109933.2-201ENST00000452651 260 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 CECR9-201ENST00000453421 199 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AC104472.2-201ENST00000469035 601 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 SNORA31.1-201ENST00000515993 133 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 SNORA31.5-201ENST00000516190 133 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 RNA5SP76-201ENST00000516277 87 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AC118273.2-201ENST00000532092 465 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AC024153.1-201ENST00000603103 365 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AL035413.2-201ENST00000604801 525 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 U6.42-201ENST00000618440 107 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 AC073308.1-201ENST00000623696 305 ntBASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.22□□□□□ -1.89
HDAC6Q9UBN7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 RNU6-1283P-201ENST00000365314 105 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 SNORA9.2-201ENST00000365361 133 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 RNU6-393P-201ENST00000384475 107 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 RNU6-1127P-201ENST00000384580 107 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 RNA5SP274-201ENST00000410484 108 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 EEF1A1P40-201ENST00000412883 573 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 RPL26P27-201ENST00000414397 437 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 HMGN2P30-201ENST00000423237 256 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 MTND3P16-201ENST00000452205 344 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 SCARNA18-201ENST00000459004 134 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 AC008716.1-201ENST00000511084 513 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 AF235103.2-201ENST00000525753 346 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 U2.17-201ENST00000611454 95 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 AC024614.3-201ENST00000637860 256 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 AC004944.1-201ENST00000517807 3059 ntBASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
HDAC6Q9UBN7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 FTLP6-201ENST00000355274 422 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 MIR412-201ENST00000362142 91 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 RNU6-715P-201ENST00000365204 103 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 SNORA4.3-201ENST00000365564 137 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 RNU4-26P-201ENST00000410270 107 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 RNU6-1025P-201ENST00000410629 104 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 HMGB1P9-201ENST00000429856 646 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 BRK1P2-201ENST00000442875 223 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 RPL21P99-201ENST00000480369 423 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 Y_RNA.654-201ENST00000497848 106 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 SUMO2P6-201ENST00000505273 288 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 MTCO3P23-201ENST00000561363 289 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 AC010525.2-201ENST00000590920 195 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 AC099654.14-201ENST00000638599 341 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 MTND4P35-201ENST00000604257 1375 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 AC233263.6-201ENST00000631132 1963 ntBASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.2□□□□□ -1.9
HDAC6Q9UBN7 HSPA8P4-201ENST00000511877 1920 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 Y_RNA.100-201ENST00000363141 102 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms