Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC013470.4-201ENST00000619978 986 ntBASIC0.72□□□□□ -2.29
COMMD3Q9UBI1 AC099063.3-201ENST00000642066 185 ntBASIC0.72□□□□□ -2.29
COMMD3Q9UBI1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 RNU6-223P-201ENST00000362830 107 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 RNU1-22P-201ENST00000363334 158 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 RNU6-414P-201ENST00000363705 104 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 RNU6-26P-201ENST00000383985 107 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 RNU6-1300P-201ENST00000391046 108 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 AP1B1P2-201ENST00000416196 106 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 RPL36AP53-201ENST00000432891 316 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 MTCO3P5-201ENST00000433620 714 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 OR6C5P-201ENST00000452388 923 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 AC114981.1-201ENST00000503897 678 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 AL731537.2-201ENST00000561565 951 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 AC136619.2-201ENST00000563361 631 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 VN1R80P-201ENST00000597126 338 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 FAM71BP1-201ENST00000604431 523 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 AC004492.1-201ENST00000607036 742 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 AC010975.3-201ENST00000618727 978 ntBASIC0.71□□□□□ -2.3
COMMD3Q9UBI1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 Y_RNA.25-201ENST00000362528 102 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 SNORD33-201ENST00000362761 85 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 RNU6-216P-201ENST00000363282 104 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 RNU6-546P-201ENST00000383991 107 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 SNORA29-201ENST00000384183 140 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 MIR515-2-201ENST00000384883 83 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 MIR515-1-201ENST00000384884 83 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AL139397.2-201ENST00000404529 772 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AL158050.1-201ENST00000416077 457 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AC027644.1-201ENST00000419595 298 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AC008267.5-201ENST00000424928 265 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 GPM6BP2-201ENST00000432046 144 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 GTF2IP3-201ENST00000433887 494 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 COX7BP2-201ENST00000437976 242 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AC114878.1-201ENST00000441166 358 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AL035666.1-201ENST00000446195 348 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 GPM6BP1-201ENST00000446387 144 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 RPS4XP11-201ENST00000446897 772 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 RNU6-1183P-201ENST00000517054 60 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 CENPUP1-201ENST00000526649 1202 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AP003392.2-201ENST00000527269 208 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 SUB1P4-201ENST00000566062 339 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AL583856.2-201ENST00000606298 543 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AC098614.4-201ENST00000607601 462 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 AL357080.1-201ENST00000617394 239 ntBASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COMMD3Q9UBI1 Y_RNA.140-201ENST00000363474 103 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 RNU1-124P-201ENST00000363861 145 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 RNU6-1280P-201ENST00000365211 107 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AC245047.4-201ENST00000433189 144 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 MTCO3P45-201ENST00000443036 613 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 SNRPFP4-201ENST00000456366 242 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 RPL9P9-202ENST00000466501 579 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AP001189.2-201ENST00000527320 189 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AC022616.8-201ENST00000533569 253 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 ZNF971P-201ENST00000562068 1249 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AC093249.1-201ENST00000567049 203 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AC107952.2-201ENST00000606048 486 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AL450270.1-201ENST00000606160 391 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AC096772.1-201ENST00000609146 564 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 AL445264.1-201ENST00000621719 171 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 MIR8063-201ENST00000621930 81 ntBASIC0.69□□□□□ -2.3
COMMD3Q9UBI1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 Y_RNA.99-201ENST00000363138 105 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 RNA5SP99-201ENST00000364020 114 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 RNU6-188P-201ENST00000364207 107 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 RNU6-343P-201ENST00000364709 104 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 AC069282.1-201ENST00000411911 526 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 TPMTP2-201ENST00000414372 726 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 BX119904.4-201ENST00000424402 301 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms