Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL079342.1-201ENST00000401460 267 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 SNORA11.4-201ENST00000408823 129 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 RNU4-26P-201ENST00000410270 107 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AL160275.3-201ENST00000423876 471 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 BX276092.3-201ENST00000424182 230 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 Z98742.2-201ENST00000431564 187 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AC009961.2-201ENST00000435771 251 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AC004383.1-201ENST00000438135 289 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 GAPDHP17-201ENST00000449858 1001 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 snoU13.15-201ENST00000459407 104 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 SNORD42A-201ENST00000459584 64 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AP001324.2-201ENST00000461163 319 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 RPL22P13-201ENST00000493291 347 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 FAM92A1P2-202ENST00000504766 877 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AC092436.1-201ENST00000506450 503 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AC107222.1-201ENST00000510899 637 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 RNA5SP112-201ENST00000515937 99 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 ACA59.2-201ENST00000517061 156 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AC060788.1-201ENST00000521318 469 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AL158211.1-201ENST00000566763 763 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 Z94722.1-201ENST00000604328 474 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AC087045.1-201ENST00000605856 382 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 AC126118.1-201ENST00000607744 628 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.94□□□□□ -2.1
CLCF1Q9UBD9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC005336.3-201ENST00000623833 2679 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 RNU6-179P-201ENST00000363350 107 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 RNU6-1072P-201ENST00000384703 107 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 RNU6-443P-201ENST00000384780 107 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 SNORA48.3-201ENST00000391081 134 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 U6atac.2-201ENST00000408644 118 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 RN7SKP32-201ENST00000410167 303 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 RNU6-387P-201ENST00000411331 105 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 MTCO3P30-201ENST00000426425 670 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 ISCA1P6-201ENST00000427740 390 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 RPS15AP9-201ENST00000439856 381 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC098826.2-201ENST00000452011 651 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AL583843.1-201ENST00000456070 346 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 RNU7-26P-201ENST00000458980 63 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 snoU13.26-201ENST00000459452 105 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC080013.2-201ENST00000460866 323 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 BET1P1-201ENST00000482276 359 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC090096.1-201ENST00000489168 390 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC116562.3-201ENST00000506136 177 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 SCARNA24.1-201ENST00000516465 137 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 RNU6-1220P-201ENST00000517126 108 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC068587.5-201ENST00000528506 175 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AP000873.5-201ENST00000533906 236 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC010186.2-204ENST00000537668 439 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC078814.3-201ENST00000553036 491 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC012414.6-201ENST00000568241 401 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 MIR548AC-201ENST00000585049 88 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC090578.1-201ENST00000604955 591 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC069294.1-201ENST00000608397 350 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 U6.42-201ENST00000618440 107 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC138649.3-201ENST00000622154 254 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AC078883.4-201ENST00000623218 367 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 AL157786.1-207ENST00000627771 695 ntBASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CLCF1Q9UBD9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 MIRLET7G-201ENST00000362280 84 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 U3.4-201ENST00000363352 213 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 RNU6-61P-201ENST00000365528 109 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 CISD1P1-201ENST00000393907 327 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 MIR1302-8-201ENST00000408342 128 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 Y_RNA.623-201ENST00000411128 95 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 RNA5SP111-201ENST00000411386 101 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AF274854.1-201ENST00000413236 615 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 RPL30P4-201ENST00000429309 333 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 514.2 ms