Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC008526.1-201ENST00000509149 338 ntBASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 AC006445.2-201ENST00000510061 472 ntBASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 RNU6-277P-201ENST00000516272 106 ntBASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 AC093027.1-201ENST00000546698 429 ntBASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 AC044792.1-201ENST00000593294 196 ntBASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 AC018692.3-201ENST00000623929 123 ntBASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 U6.99-201ENST00000637524 83 ntBASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
DNMT3BQ9UBC3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 Y_RNA.387-201ENST00000383918 102 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 Y_RNA.474-201ENST00000384341 102 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 MIR34A-201ENST00000385130 110 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AL360182.1-201ENST00000397433 468 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 RPL5P18-201ENST00000406671 891 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 MIR548K-201ENST00000408406 116 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 RNA5SP293-201ENST00000410527 113 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 RPS20P15-201ENST00000412792 311 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 HMGN2P30-201ENST00000423237 256 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 HMGB1P9-201ENST00000429856 646 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 ARF4P2-201ENST00000430209 526 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 BX679664.1-201ENST00000434429 253 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AL590664.1-201ENST00000448065 339 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AC092798.1-201ENST00000458542 409 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AC104472.2-201ENST00000469035 601 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 COPS8P3-201ENST00000526024 482 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AC025423.5-201ENST00000550230 219 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 MIR4782-201ENST00000577987 79 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 RNU6-85P-201ENST00000605989 107 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.41□□□□□ -1.86
DNMT3BQ9UBC3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
DNMT3BQ9UBC3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.4□□□□□ -1.86
DNMT3BQ9UBC3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
DNMT3BQ9UBC3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
DNMT3BQ9UBC3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
DNMT3BQ9UBC3 Y_RNA.67-201ENST00000362870 100 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 Y_RNA.135-201ENST00000363439 95 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 SNORA80A-201ENST00000363922 136 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 SNORD14B-201ENST00000364533 90 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AL138885.1-201ENST00000405921 675 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 MIR548F5-201ENST00000408421 86 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC126124.2-201ENST00000413542 321 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AL592148.1-201ENST00000413568 445 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC236972.2-201ENST00000434979 310 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 RPL37P4-201ENST00000448908 268 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC233279.1-201ENST00000455300 423 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 SNRPGP3-201ENST00000469405 227 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 RN7SL442P-201ENST00000473804 320 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 RPL30P14-201ENST00000482744 348 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC096576.1-201ENST00000489014 359 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC026801.1-201ENST00000497178 464 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 RPS27P27-201ENST00000498779 255 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 SCARNA15.1-201ENST00000516384 125 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 MIR2276-201ENST00000516886 89 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AP005639.2-201ENST00000527592 928 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC026371.1-201ENST00000551867 419 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AMZ2P1-203ENST00000565833 850 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 MIR3609-201ENST00000582661 80 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 MIR4298-201ENST00000584380 73 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 OR1M4P-201ENST00000589199 287 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 APOOP1-201ENST00000604695 592 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC008962.1-201ENST00000605729 304 ntBASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 AC017071.1-201ENST00000564407 2204 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms