Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL359212.1-201ENST00000556608 614 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AL133153.1-201ENST00000557756 303 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 MIR4782-201ENST00000577987 79 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AL713866.2-201ENST00000603579 219 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC005034.5-201ENST00000604219 466 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC88CQ9P219 MIR126-201ENST00000362291 85 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 MIR934-201ENST00000401241 83 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 RNA5SP450-201ENST00000411206 102 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 C1DP1-201ENST00000426049 402 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 USP9YP11-201ENST00000427537 717 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC88CQ9P219 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC88CQ9P219 BRK1P2-201ENST00000442875 223 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC88CQ9P219 AL031313.1-201ENST00000448435 256 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC88CQ9P219 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.17□□□□□ -2.22
CCDC88CQ9P219 AC108729.1-201ENST00000487812 947 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 AC096745.1-201ENST00000509945 370 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 SNORA25.11-201ENST00000515935 105 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 RNA5SP102-201ENST00000516865 106 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.17□□□□□ -2.22
CCDC88CQ9P219 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
CCDC88CQ9P219 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.17□□□□□ -2.22
CCDC88CQ9P219 BNIP3P23-201ENST00000599655 511 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 AL391001.1-201ENST00000602747 715 ntBASIC1.17□□□□□ -2.22
CCDC88CQ9P219 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.17□□□□□ -2.22
CCDC88CQ9P219 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 Y_RNA.234-201ENST00000364409 97 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 RNU6-1032P-201ENST00000384100 107 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AC068050.1-201ENST00000394891 380 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AL136310.1-201ENST00000404926 654 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 RAC1P6-201ENST00000423911 575 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 GTF2IP3-201ENST00000433887 494 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 TIMM9P1-201ENST00000436122 256 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 MTND1P36-201ENST00000522384 936 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AP004247.1-201ENST00000531556 1289 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 PSMA3P-201ENST00000555485 635 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AL157871.3-201ENST00000557231 293 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AL031274.2-201ENST00000599419 203 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 NACAP2-201ENST00000318548 624 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 Y_RNA.40-201ENST00000362645 93 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AC127391.1-201ENST00000411737 98 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AC097463.2-201ENST00000421074 142 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 RPL36AP53-201ENST00000432891 316 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AL353706.1-201ENST00000436728 494 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 USP9YP25-201ENST00000457708 443 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 SNORD97-201ENST00000459187 142 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AC104982.1-201ENST00000478775 574 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 RNU6-927P-201ENST00000516199 100 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 RNU7-193P-201ENST00000516723 65 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AL358072.1-201ENST00000604156 575 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AL592221.1-201ENST00000605266 382 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AC087045.1-201ENST00000605856 382 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AL355472.4-201ENST00000610233 626 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AL133445.2-201ENST00000611191 527 ntBASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC88CQ9P219 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
CCDC88CQ9P219 RNU1-39P-201ENST00000383897 165 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 RPL23AP6-201ENST00000446637 472 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 HMGN2P10-201ENST00000448085 265 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 AC009474.2-201ENST00000451383 136 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.15□□□□□ -2.22
CCDC88CQ9P219 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.15□□□□□ -2.22
CCDC88CQ9P219 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 AC084364.2-201ENST00000546924 395 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.22
CCDC88CQ9P219 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.15□□□□□ -2.22
CCDC88CQ9P219 AC090970.3-201ENST00000612566 866 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 AL356596.1-201ENST00000624230 379 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 AP002371.2-201ENST00000624450 503 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 AC126544.2-201ENST00000625174 749 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.15□□□□□ -2.22
CCDC88CQ9P219 AC013437.2-201ENST00000639587 677 ntBASIC1.15□□□□□ -2.22
CCDC88CQ9P219 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.15□□□□□ -2.23
CCDC88CQ9P219 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CCDC88CQ9P219 RNU6-486P-201ENST00000363116 107 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 RNU6-853P-201ENST00000364306 107 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 RNU6-701P-201ENST00000384059 107 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AC069282.1-201ENST00000411911 526 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms