Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 MIR5004-201ENST00000579078 107 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 UBL5P2-201ENST00000583788 219 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 MIR4506-201ENST00000584693 77 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AC002553.4-201ENST00000616896 331 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 MIR8057-201ENST00000620957 69 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AC018692.3-201ENST00000623929 123 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AC073476.4-201ENST00000628409 72 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AC008264.2-201ENST00000610193 3731 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 CDC27P3-201ENST00000635418 1910 ntBASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.99□□□□□ -1.93
HCN3Q9P1Z3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AP003122.5-201ENST00000527668 3766 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 RNU6-82P-201ENST00000363970 107 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 RNU1-100P-201ENST00000365255 165 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 SNORD21-201ENST00000383953 95 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 RAP1BP3-201ENST00000407180 549 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 Y_RNA.615-201ENST00000410769 117 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 RNU6-373P-201ENST00000411247 98 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AL358075.3-201ENST00000426289 226 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 TRIAP1P1-201ENST00000427062 225 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AL671855.1-201ENST00000446875 1203 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AC006483.1-201ENST00000487308 313 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AC083904.1-201ENST00000487828 231 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 GZMAP1-201ENST00000503054 631 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AC079140.5-201ENST00000507882 310 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AC090115.3-201ENST00000553218 849 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 MTCO3P23-201ENST00000561363 289 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 MIR3941-201ENST00000582572 103 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AC068944.2-201ENST00000610373 403 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AL020991.1-201ENST00000612314 373 ntBASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HCN3Q9P1Z3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-37P-201ENST00000362692 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-11P-201ENST00000364234 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-7-201ENST00000364784 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-8-201ENST00000365467 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-25P-201ENST00000383873 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-1-201ENST00000383898 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-48P-201ENST00000384161 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-36P-201ENST00000384172 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-4P-201ENST00000384205 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-5P-201ENST00000384238 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-3P-201ENST00000384314 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-16P-201ENST00000384385 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-15P-201ENST00000384534 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-2-201ENST00000384627 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-29P-201ENST00000384637 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-9-201ENST00000384776 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-33P-201ENST00000384793 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 MIR147B-201ENST00000390185 80 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RPLP0P7-201ENST00000416050 667 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RPL7P37-201ENST00000425095 738 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 PTGES3P4-201ENST00000426243 356 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 USP9YP28-201ENST00000435142 589 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AL590639.1-201ENST00000456484 337 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-1208P-201ENST00000459588 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RPL31P41-201ENST00000477967 372 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AF213884.2-201ENST00000510417 903 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 SNORD19.2-201ENST00000516978 73 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 ACA59.2-201ENST00000517061 156 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 SCARNA20.6-201ENST00000517251 106 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AC069113.1-201ENST00000517763 267 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AP004607.1-201ENST00000524456 203 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AP000763.2-201ENST00000540641 163 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AC008121.1-201ENST00000603244 268 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AC091152.3-201ENST00000604227 325 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 RNU6-6P-201ENST00000606623 107 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms