Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 snoU2_19.1-201ENST00000362361 80 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 SNORA62.1-201ENST00000364287 154 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 Y_RNA.472-201ENST00000384322 102 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 MIR196B-201ENST00000384852 84 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 MIR34A-201ENST00000385130 110 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 MIR1305-201ENST00000408300 86 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 Y_RNA.597-201ENST00000410463 100 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AL161935.2-201ENST00000414627 60 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 C8orf59P1-201ENST00000429930 303 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 UBE2V1P8-201ENST00000437166 265 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 NDUFB1P2-201ENST00000449477 176 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-333P-201ENST00000459117 107 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 snoU109.2-201ENST00000459316 135 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC114781.4-201ENST00000513707 639 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC091163.3-201ENST00000518269 1144 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC087276.1-201ENST00000529659 480 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AP003122.4-201ENST00000530980 758 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC068338.1-201ENST00000565567 176 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC137800.2-201ENST00000574375 120 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC005786.1-201ENST00000588553 154 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC022022.2-201ENST00000602989 360 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AC123912.5-201ENST00000605470 343 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AL121890.5-201ENST00000620848 304 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 AL589994.2-201ENST00000621124 579 ntBASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.69□□□□□ -2.3
CDC42SE1Q9NRR8 MIR340-201ENST00000362125 95 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 SNORD14B-201ENST00000364533 90 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 Y_RNA.332-201ENST00000365271 113 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 SNORA70.7-201ENST00000384159 133 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AL079342.1-201ENST00000401460 267 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC009518.2-201ENST00000418056 731 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 MTCYBP5-201ENST00000423752 1135 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AL135790.2-201ENST00000437701 267 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 MTND1P30-201ENST00000441241 901 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 JTBP1-201ENST00000441314 247 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 OR2AQ1P-201ENST00000451972 200 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC108729.1-201ENST00000487812 947 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AL133373.1-201ENST00000497098 94 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 WBP1LP4-201ENST00000505043 344 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 YWHAEP4-201ENST00000505390 198 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC112198.4-201ENST00000515450 351 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 SNORA3.4-201ENST00000515969 96 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 RNA5SP216-201ENST00000516111 123 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-677P-201ENST00000516914 101 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 MIR744-201ENST00000578242 98 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 RN7SL753P-201ENST00000581238 290 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC174048.1-201ENST00000603389 144 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC103810.9-201ENST00000606688 112 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AL391813.2-201ENST00000609113 322 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC063943.3-201ENST00000615562 356 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AL078604.3-201ENST00000615580 211 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC018926.1-201ENST00000616335 435 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AP000943.4-201ENST00000622912 357 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 AC095038.3-201ENST00000634439 195 ntBASIC0.68□□□□□ -2.3
CDC42SE1Q9NRR8 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 OR5J1P-201ENST00000313544 939 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 MIR412-201ENST00000362142 91 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 RNA5SP327-201ENST00000362494 101 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-212P-201ENST00000362642 104 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 RNU5E-6P-201ENST00000365574 115 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 SNORD116-20-201ENST00000384529 92 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 ERHP2-201ENST00000402323 299 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 MIR1267-201ENST00000408723 78 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AC092648.1-201ENST00000425870 423 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AL627311.1-201ENST00000431514 115 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms