Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SSU72Q9NP77 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSU72Q9NP77 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSU72Q9NP77 RNA5SP361-201ENST00000362686 118 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 SNORD115-32-201ENST00000364079 82 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSU72Q9NP77 RNU6-968P-201ENST00000384076 107 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 SNORA70F-201ENST00000384142 135 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 MIR32-201ENST00000384965 70 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 RNU1-139P-201ENST00000391307 165 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 U3.37-201ENST00000408528 213 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 MIR1290-201ENST00000408735 78 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 RAB9AP3-201ENST00000412737 573 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 AC079355.1-201ENST00000421770 223 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 AL157831.1-201ENST00000426134 473 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 AL606753.1-201ENST00000427435 87 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 HMGN2P21-201ENST00000447764 270 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 RAB9AP1-201ENST00000449393 573 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 RPL7AP6-201ENST00000477943 801 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.17□□□□□ -1.74
SSU72Q9NP77 UBE2CP3-201ENST00000502715 450 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 RAB9BP1-201ENST00000519581 626 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.17□□□□□ -1.74
SSU72Q9NP77 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.17□□□□□ -1.74
SSU72Q9NP77 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSU72Q9NP77 RN7SL753P-201ENST00000581238 290 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 RMST_6.1-201ENST00000611980 203 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 SCARNA4-202ENST00000625402 129 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 U6.99-201ENST00000637524 83 ntBASIC4.17□□□□□ -1.74
SSU72Q9NP77 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SSU72Q9NP77 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.17□□□□□ -1.74
SSU72Q9NP77 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
SSU72Q9NP77 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSU72Q9NP77 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSU72Q9NP77 HAUS6P2-201ENST00000433254 2404 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSU72Q9NP77 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.16□□□□□ -1.74
SSU72Q9NP77 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.16□□□□□ -1.74
SSU72Q9NP77 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSU72Q9NP77 RNU6-326P-201ENST00000365480 107 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSU72Q9NP77 RNU4-30P-201ENST00000410245 143 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 RPL7AP25-201ENST00000423357 805 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.16□□□□□ -1.74
SSU72Q9NP77 RPS15AP7-201ENST00000439294 405 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 SSXP4-201ENST00000451349 245 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 snoU13.4-201ENST00000458916 104 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 RN7SL271P-201ENST00000487601 295 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 RPL7P47-201ENST00000497299 556 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 BTF3L4P4-201ENST00000506381 449 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 SEPT14P8-201ENST00000508026 178 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.16□□□□□ -1.74
SSU72Q9NP77 RNU6-1183P-201ENST00000517054 60 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.16□□□□□ -1.74
SSU72Q9NP77 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.16□□□□□ -1.74
SSU72Q9NP77 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 AP005019.3-201ENST00000620418 560 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 AC021753.1-201ENST00000635724 168 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 U2.21-201ENST00000637295 81 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.16□□□□□ -1.74
SSU72Q9NP77 AL356489.2-201ENST00000566968 3528 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSU72Q9NP77 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SSU72Q9NP77 IPO8P1-201ENST00000455509 3109 ntBASIC4.16□□□□□ -1.74
SSU72Q9NP77 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSU72Q9NP77 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SSU72Q9NP77 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
SSU72Q9NP77 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SSU72Q9NP77 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SSU72Q9NP77 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
SSU72Q9NP77 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SSU72Q9NP77 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.15□□□□□ -1.75
SSU72Q9NP77 Y_RNA.292-201ENST00000364904 97 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 AL033519.2-201ENST00000403958 392 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 RN7SKP51-201ENST00000410781 304 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.15□□□□□ -1.75
SSU72Q9NP77 Z82210.1-201ENST00000440037 231 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 AC098831.1-201ENST00000440661 216 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 AC009237.8-201ENST00000445492 379 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 AL353705.4-201ENST00000449661 238 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 RPS26P39-201ENST00000469206 341 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 COX6CP14-201ENST00000469580 174 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 RPS29P19-201ENST00000479709 171 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 RNA5SP291-201ENST00000517222 105 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 GNRHR2P1-201ENST00000555315 631 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 ZNF192P1-203ENST00000565888 810 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 MIR4282-201ENST00000583613 67 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.15□□□□□ -1.75
SSU72Q9NP77 SNORA43.4-201ENST00000629559 138 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 AC140479.6-201ENST00000633535 357 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 AC132825.6-201ENST00000638861 357 ntBASIC4.15□□□□□ -1.75
SSU72Q9NP77 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSU72Q9NP77 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSU72Q9NP77 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSU72Q9NP77 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSU72Q9NP77 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSU72Q9NP77 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSU72Q9NP77 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSU72Q9NP77 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms