Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
GCM1Q9NP62 MIR4423-201ENST00000580922 80 ntBASIC3.79□□□□□ -1.8
GCM1Q9NP62 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.79□□□□□ -1.8
GCM1Q9NP62 MIR5096-201ENST00000583713 70 ntBASIC3.79□□□□□ -1.8
GCM1Q9NP62 RMST_6.1-201ENST00000611980 203 ntBASIC3.79□□□□□ -1.8
GCM1Q9NP62 AC073349.3-201ENST00000617616 186 ntBASIC3.79□□□□□ -1.8
GCM1Q9NP62 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.79□□□□□ -1.8
GCM1Q9NP62 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.79□□□□□ -1.8
GCM1Q9NP62 AC091905.2-201ENST00000623143 306 ntBASIC3.79□□□□□ -1.8
GCM1Q9NP62 AC112200.1-201ENST00000625015 234 ntBASIC3.79□□□□□ -1.8
GCM1Q9NP62 MIR7641-1-201ENST00000627518 61 ntBASIC3.79□□□□□ -1.8
GCM1Q9NP62 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.79□□□□□ -1.8
GCM1Q9NP62 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.79□□□□□ -1.8
GCM1Q9NP62 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
GCM1Q9NP62 RBBP8P1-201ENST00000449447 1844 ntBASIC3.79□□□□□ -1.8
GCM1Q9NP62 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GCM1Q9NP62 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
GCM1Q9NP62 OR4G2P-202ENST00000641004 1759 ntBASIC3.79□□□□□ -1.8
GCM1Q9NP62 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.78□□□□□ -1.8
GCM1Q9NP62 MFSD8-242ENST00000641690 4199 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GCM1Q9NP62 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.78□□□□□ -1.8
GCM1Q9NP62 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
GCM1Q9NP62 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GCM1Q9NP62 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.78□□□□□ -1.8
GCM1Q9NP62 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.78□□□□□ -1.8
GCM1Q9NP62 RNA5SP447-201ENST00000363749 119 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 RNA5SP189-201ENST00000364920 115 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 Y_RNA.308-201ENST00000365043 101 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 Y_RNA.418-201ENST00000384029 102 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 RNU6-1289P-201ENST00000384431 106 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 Y_RNA.497-201ENST00000384447 98 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 Y_RNA.580-201ENST00000391004 95 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 SNORD12B-201ENST00000410433 91 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 Y_RNA.625-201ENST00000411256 107 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 ELOCP19-201ENST00000411919 318 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 AL390729.2-201ENST00000416137 156 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 AL356387.2-201ENST00000422272 243 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 MTCO1P39-201ENST00000426148 480 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 AC091390.3-201ENST00000426478 338 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 AC079780.1-201ENST00000428259 207 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 SNORD2.1-201ENST00000458762 69 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 RPL23AP75-201ENST00000491601 451 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 AC091959.1-201ENST00000495857 238 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.78□□□□□ -1.8
GCM1Q9NP62 AC005921.1-201ENST00000510589 286 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 RNU2-58P-201ENST00000516403 183 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 AP005660.1-201ENST00000522972 293 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.78□□□□□ -1.8
GCM1Q9NP62 AP004242.1-201ENST00000533701 349 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 RPL23AP88-201ENST00000605759 454 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 NOL8P1-201ENST00000508336 3529 ntBASIC3.78□□□□□ -1.8
GCM1Q9NP62 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GCM1Q9NP62 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GCM1Q9NP62 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GCM1Q9NP62 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
GCM1Q9NP62 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.78□□□□□ -1.8
GCM1Q9NP62 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.78□□□□□ -1.8
GCM1Q9NP62 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GCM1Q9NP62 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GCM1Q9NP62 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.78□□□□□ -1.81
GCM1Q9NP62 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
GCM1Q9NP62 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GCM1Q9NP62 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GCM1Q9NP62 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GCM1Q9NP62 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
GCM1Q9NP62 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GCM1Q9NP62 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 MIR410-201ENST00000362222 80 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 SNORD115-32-201ENST00000364079 82 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 Y_RNA.245-201ENST00000364493 95 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 RNU1-63P-201ENST00000383902 164 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 RNU6-968P-201ENST00000384076 107 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 MIR607-201ENST00000385241 96 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 SNORA46.1-201ENST00000391069 153 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 SNORA40C-201ENST00000391285 128 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 RNU1-139P-201ENST00000391307 165 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 RPL23AP48-201ENST00000406913 488 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 FAR2P2-201ENST00000413041 594 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 AC124916.1-201ENST00000444020 547 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 RPL30P1-201ENST00000488676 339 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 AC010265.1-201ENST00000513509 211 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 RNY3P16-201ENST00000516338 101 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GCM1Q9NP62 AC099506.2-201ENST00000623074 221 ntBASIC3.77□□□□□ -1.81
GCM1Q9NP62 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.77□□□□□ -1.81
GCM1Q9NP62 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms