Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RAC1P3-201ENST00000416129 580 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 RPL21P38-201ENST00000418090 167 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 MTCO3P29-201ENST00000432119 779 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 RNU7-87P-201ENST00000459343 62 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 AC108022.1-201ENST00000493466 478 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 AC007458.1-201ENST00000542812 373 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 AL442163.3-201ENST00000554110 156 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 MIR5195-201ENST00000583555 115 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 AC073410.2-201ENST00000603240 332 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 U3.45-201ENST00000607547 219 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 U6.99-201ENST00000637524 83 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
ZFYVE28Q9HCC9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
ZFYVE28Q9HCC9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.65□□□□□ -1.66
ZFYVE28Q9HCC9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ZFYVE28Q9HCC9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
ZFYVE28Q9HCC9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.65□□□□□ -1.66
ZFYVE28Q9HCC9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.65□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.20-201ENST00000362479 113 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 RNU6-336P-201ENST00000364891 107 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 RNA5SP97-201ENST00000365006 84 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 Y_RNA.416-201ENST00000384014 113 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 Y_RNA.439-201ENST00000384119 94 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 BTF3L4P2-201ENST00000392798 346 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 RNU6-1203P-201ENST00000410703 110 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 SNRPEP9-201ENST00000436794 238 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 AL513124.1-201ENST00000450410 614 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 AL645939.1-201ENST00000453429 797 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 AC098869.1-201ENST00000481627 292 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 AC067942.3-201ENST00000512025 362 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 RNU6-111P-201ENST00000517179 105 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 RNU6-1073P-201ENST00000517182 106 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 MIR2355-201ENST00000517199 87 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 AC007785.2-201ENST00000598627 1916 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 AP001148.1-201ENST00000624124 2359 ntBASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ZFYVE28Q9HCC9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 Y_RNA.84-201ENST00000363011 104 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 RNU6-200P-201ENST00000364743 107 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 SNORD96B-201ENST00000386148 79 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 RPL21P75-201ENST00000396599 483 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 RPL21P28-201ENST00000401418 483 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 NDUFB4P4-201ENST00000404822 243 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AL590135.1-201ENST00000422215 156 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AL590556.1-201ENST00000423231 483 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AC004383.1-201ENST00000438135 289 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 RPL21P11-201ENST00000461458 483 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 RPL21P39-201ENST00000463605 483 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AC087190.1-201ENST00000484462 480 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AC107032.1-201ENST00000485945 480 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AC132942.1-201ENST00000486753 483 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AC093591.1-201ENST00000491435 481 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 RPL21P16-201ENST00000495531 483 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 RNA5SP179-201ENST00000517284 121 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AC093023.1-201ENST00000547375 507 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 MIR4782-201ENST00000577987 79 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AC087499.8-201ENST00000578406 226 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 RPL23AP78-201ENST00000599928 470 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AC136601.2-201ENST00000604356 474 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 SCARNA4-202ENST00000625402 129 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 U6.105-201ENST00000637379 88 ntBASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZFYVE28Q9HCC9 AC018529.3-201ENST00000624212 2254 ntBASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZFYVE28Q9HCC9 RNU6-78P-201ENST00000362897 107 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms