Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC009902.1-201ENST00000519351 183 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 AC025755.1-201ENST00000521306 278 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 AK6P1-201ENST00000540219 478 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 HMGN2P15-201ENST00000585707 270 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 AP003465.2-201ENST00000602571 373 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP44Q9H0E7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP44Q9H0E7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP44Q9H0E7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP44Q9H0E7 RNU6-658P-201ENST00000384606 106 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USP44Q9H0E7 RNU6-550P-201ENST00000391057 101 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 RNU6-1158P-201ENST00000391167 107 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 RNU6-193P-201ENST00000410977 107 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.12□□□□□ -1.91
USP44Q9H0E7 MYL8P-204ENST00000431574 518 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.12□□□□□ -1.91
USP44Q9H0E7 AL513328.1-201ENST00000446460 224 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 AC006512.1-201ENST00000468816 291 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 AL163973.1-201ENST00000484753 577 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.12□□□□□ -1.91
USP44Q9H0E7 RNU6-572P-201ENST00000516724 80 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 RNU6-1183P-201ENST00000517054 60 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.12□□□□□ -1.91
USP44Q9H0E7 AC104383.1-201ENST00000530297 370 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.12□□□□□ -1.91
USP44Q9H0E7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.12□□□□□ -1.91
USP44Q9H0E7 AC010653.1-201ENST00000571108 881 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.12□□□□□ -1.91
USP44Q9H0E7 MIR5092-201ENST00000583139 88 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP44Q9H0E7 U4.5-201ENST00000617137 123 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
USP44Q9H0E7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.12□□□□□ -1.91
USP44Q9H0E7 AC110079.1-202ENST00000635213 138 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.12□□□□□ -1.91
USP44Q9H0E7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP44Q9H0E7 AC069528.2-201ENST00000624849 1991 ntBASIC3.12□□□□□ -1.91
USP44Q9H0E7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
USP44Q9H0E7 RNU4-82P-201ENST00000362443 140 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 RNU6-371P-201ENST00000364283 108 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 RNU6-996P-201ENST00000365438 107 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 MIR592-201ENST00000384959 97 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 RNU6-750P-201ENST00000390946 107 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AL359511.1-201ENST00000402970 211 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AL590002.1-201ENST00000406554 418 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 RNU6-648P-201ENST00000410190 107 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.11□□□□□ -1.91
USP44Q9H0E7 ATG3P1-201ENST00000419507 911 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AL627311.1-201ENST00000431514 115 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 FDX1P2-201ENST00000450769 375 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.11□□□□□ -1.91
USP44Q9H0E7 RPS29P12-201ENST00000460178 152 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC083798.1-201ENST00000472671 131 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 RPS26P21-201ENST00000475397 348 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC139453.3-201ENST00000493276 369 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 RPS27P26-201ENST00000494583 239 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC011352.1-201ENST00000512300 793 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 RPL23AP94-201ENST00000512518 302 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 Y_RNA.693-201ENST00000516641 110 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 SNORA31.19-201ENST00000517079 126 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.11□□□□□ -1.91
USP44Q9H0E7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC021739.1-201ENST00000559631 174 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC136619.2-201ENST00000563361 631 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 HMGB1P33-201ENST00000563485 527 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC107304.1-201ENST00000604229 296 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 MTND4LP5-201ENST00000605152 292 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC087045.1-201ENST00000605856 382 ntBASIC3.11□□□□□ -1.91
USP44Q9H0E7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.11□□□□□ -1.91
USP44Q9H0E7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USP44Q9H0E7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
USP44Q9H0E7 AL591416.1-201ENST00000404015 867 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 RNA5SP344-201ENST00000411081 104 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.1□□□□□ -1.91
USP44Q9H0E7 MTCO3P30-201ENST00000426425 670 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 AC093151.1-201ENST00000427711 313 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 AL606489.2-201ENST00000433886 234 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 RPL7P54-201ENST00000438336 674 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 AC092473.1-201ENST00000441098 221 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.1□□□□□ -1.91
USP44Q9H0E7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.1□□□□□ -1.91
USP44Q9H0E7 SNRPFP3-201ENST00000457792 225 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 RPS29P15-201ENST00000458329 171 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.1□□□□□ -1.91
USP44Q9H0E7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.1□□□□□ -1.91
USP44Q9H0E7 SNORA40.12-201ENST00000516329 111 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 RN7SKP219-201ENST00000516825 296 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 OR5AQ1P-201ENST00000527596 927 ntBASIC3.1□□□□□ -1.91
USP44Q9H0E7 ELOCP31-201ENST00000540463 467 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms