Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AC109927.2-201ENST00000506416 303 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 RNU6-965P-201ENST00000516721 96 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 RNU6-677P-201ENST00000516914 101 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AC087276.1-201ENST00000529659 480 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AC110588.1-201ENST00000559699 137 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AC112220.3-201ENST00000605502 502 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AC072039.2-201ENST00000608883 439 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AC087241.4-201ENST00000612441 480 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AC092656.1-203ENST00000624134 423 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AC110994.2-201ENST00000635481 492 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AC106858.1-201ENST00000637497 429 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL356292.1-201ENST00000283110 373 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 Y_RNA.33-201ENST00000362591 102 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 RNU6-190P-201ENST00000384154 102 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 MIR1304-201ENST00000408243 91 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 MIR1305-201ENST00000408300 86 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 RNA5SP501-201ENST00000410990 112 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL022400.1-201ENST00000423946 935 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL591704.1-201ENST00000432574 275 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC015922.2-201ENST00000435593 184 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL606517.1-201ENST00000446914 387 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC093899.1-201ENST00000457984 376 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL139824.2-201ENST00000458731 1095 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 RPL31P58-201ENST00000469001 379 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC104982.1-201ENST00000478775 574 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC092436.1-201ENST00000506450 503 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC099786.3-201ENST00000565735 1410 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 VN1R82P-201ENST00000601481 356 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AP001981.2-201ENST00000603241 418 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL670379.2-201ENST00000604983 252 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC016925.2-201ENST00000605108 242 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AP000860.1-201ENST00000605250 559 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL670379.4-201ENST00000605279 254 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 RNU6-88P-201ENST00000606801 100 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL391813.2-201ENST00000609113 322 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC108747.1-201ENST00000609508 535 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.19□□□□□ -2.22
NKX6-2Q9C056 uc_338.15-201ENST00000615470 191 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AC084768.2-201ENST00000622736 221 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL138955.1-201ENST00000622881 1040 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 AL138960.2-201ENST00000625145 535 ntBASIC1.19□□□□□ -2.22
NKX6-2Q9C056 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 MIR208A-201ENST00000362287 71 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 RNU6-1010P-201ENST00000362757 107 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 RNU6-944P-201ENST00000364023 107 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 RNU6-743P-201ENST00000364151 106 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 Y_RNA.333-201ENST00000365274 102 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 RNY3P13-201ENST00000365542 102 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 RNU6-546P-201ENST00000383991 107 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 MIR583-201ENST00000384846 75 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 MIR517C-201ENST00000385103 95 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 BTF3L4P2-201ENST00000392798 346 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 RNU4-22P-201ENST00000411058 166 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 EIF4EP2-201ENST00000422816 654 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 UBE2V1P4-201ENST00000425374 344 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 AL121601.2-201ENST00000438019 707 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 HMGN2P23-201ENST00000456759 269 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 PTP4A1P4-201ENST00000512479 322 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 AC092325.1-201ENST00000566449 554 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 AC012065.4-201ENST00000602445 679 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 AL365204.3-201ENST00000612448 685 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 MIR7843-201ENST00000622274 79 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.18□□□□□ -2.22
NKX6-2Q9C056 AC091812.1-201ENST00000432235 1948 ntBASIC1.18□□□□□ -2.22
NKX6-2Q9C056 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms