Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 HMGB3P12-201ENST00000438745 556 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC093899.1-201ENST00000457984 376 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 SNORA59A-201ENST00000459326 152 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC117503.1-201ENST00000472241 394 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC007182.2-201ENST00000489251 402 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 SNORA25.11-201ENST00000515935 105 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 RNA5SP402-201ENST00000517148 110 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC079598.5-201ENST00000547460 117 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC087883.1-201ENST00000551882 391 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC068790.2-201ENST00000602601 557 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AL355297.2-201ENST00000604792 129 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC122108.2-201ENST00000611946 526 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 MIR6852-201ENST00000621699 66 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC092656.1-203ENST00000624134 423 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 AC138627.2-201ENST00000624202 601 ntBASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CHRDL1Q9BU40 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 ZNF658B-202ENST00000615961 3375 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 RNU6-898P-201ENST00000365627 104 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 RNU6-1119P-201ENST00000384349 108 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 MIR558-201ENST00000384920 94 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 MTND3P17-201ENST00000416968 344 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 DLGAP5P1-201ENST00000430307 464 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AL591212.2-201ENST00000433923 257 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AL136380.1-201ENST00000447970 162 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 MTCO3P7-201ENST00000510008 774 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 Y_RNA.689-201ENST00000516589 107 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 RNU6-677P-201ENST00000516914 101 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 SNORA31.19-201ENST00000517079 126 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC090572.1-201ENST00000519251 160 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 CYCSP26-201ENST00000534107 320 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC073648.5-201ENST00000603502 305 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC245014.2-201ENST00000603689 287 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC246785.4-201ENST00000605374 287 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AL158032.1-201ENST00000605401 106 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AL139286.2-201ENST00000606838 396 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 RNU6-91P-201ENST00000607774 107 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AC091834.1-201ENST00000614543 472 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 MTND4P5-201ENST00000435821 1374 ntBASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.06□□□□□ -2.08
CHRDL1Q9BU40 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AC138393.1-203ENST00000327086 343 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 OR56A5-201ENST00000340110 738 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 RNU6-960P-201ENST00000364056 120 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 OR5H15-201ENST00000383696 930 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 SNORA24.1-201ENST00000384401 135 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 Y_RNA.559-201ENST00000384686 107 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 SNORD116-4-201ENST00000384733 96 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AL356057.3-201ENST00000402607 340 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 RNU2-39P-201ENST00000410604 198 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 USP9YP14-201ENST00000430663 563 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AL591704.1-201ENST00000432574 275 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AC105272.1-201ENST00000438604 198 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AL078601.1-201ENST00000444542 271 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AC112771.1-201ENST00000463581 102 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AC090515.1-201ENST00000465295 476 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AC011005.2-201ENST00000487324 359 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 AC108078.2-201ENST00000510750 236 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 Y_RNA.655-201ENST00000515919 96 ntBASIC2.05□□□□□ -2.08
CHRDL1Q9BU40 RN7SKP298-201ENST00000515950 94 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms