Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU6-16P-201ENST00000384385 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-15P-201ENST00000384534 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-2-201ENST00000384627 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-29P-201ENST00000384637 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-9-201ENST00000384776 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-33P-201ENST00000384793 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 MIR325-201ENST00000385260 98 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 HMGN2P8-201ENST00000391458 268 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RPL21P17-201ENST00000397467 475 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 Y_RNA.618-201ENST00000410949 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 AL096701.2-201ENST00000416920 238 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 AL035423.1-201ENST00000420331 213 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 SNRPEP9-201ENST00000436794 238 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 ANP32BP2-201ENST00000454525 545 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 AC112492.4-201ENST00000456549 352 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 AC010655.3-201ENST00000478818 450 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 AC139453.3-201ENST00000493276 369 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 ACA59.1-201ENST00000515966 143 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 SNORA31.19-201ENST00000517079 126 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 CBX3P8-201ENST00000532412 525 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 MIR4273-201ENST00000582824 84 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-6P-201ENST00000606623 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 AL034408.1-202ENST00000636088 415 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 Y_RNA.424-201ENST00000384063 103 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 RNU6-933P-201ENST00000384424 107 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 Y_RNA.577-201ENST00000384794 101 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 MT-TG-201ENST00000387429 68 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 SNORA40C-201ENST00000391285 128 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AL513475.1-201ENST00000406602 315 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 PGBD4P6-201ENST00000421501 610 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AC092047.1-201ENST00000424997 240 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AC007560.1-201ENST00000426912 237 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 CHEK2P4-201ENST00000450340 246 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 RN7SL93P-201ENST00000463035 293 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 FO393415.2-201ENST00000480085 343 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 MRPS35P2-201ENST00000508242 191 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 RNU1-95P-201ENST00000516357 160 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 RNU1-128P-201ENST00000516704 160 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 RNU6-1282P-201ENST00000516735 96 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AC007991.1-201ENST00000522680 631 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 IGKV2D-19-201ENST00000523346 262 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AC090877.1-201ENST00000561418 344 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 ZNF192P1-203ENST00000565888 810 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 CPDP1-201ENST00000579660 283 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AP000787.2-201ENST00000604432 568 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AL137849.1-201ENST00000604767 169 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 SNORA62.6-201ENST00000606322 83 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AL391261.4-201ENST00000616012 481 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AC084757.4-201ENST00000616350 526 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AC012314.7-201ENST00000619693 93 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AC007792.1-201ENST00000623023 402 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 AC138627.2-201ENST00000624202 601 ntBASIC3.57□□□□□ -1.84
NDC1Q9BTX1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NDC1Q9BTX1 ZNF72P-201ENST00000425869 1908 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 RNU1-18P-201ENST00000363062 164 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 RNY1P16-201ENST00000363063 111 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 Y_RNA.188-201ENST00000363952 111 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 SNORA5A-201ENST00000384111 134 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 RNU6-140P-201ENST00000384566 108 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 RNU6-1222P-201ENST00000384615 107 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 MIR10A-201ENST00000385043 110 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 MIR34A-201ENST00000385130 110 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 RNA5SP424-201ENST00000390988 115 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 RNU6-1109P-201ENST00000391187 107 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 HLFP1-201ENST00000402375 499 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 U3.42-201ENST00000408746 214 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 RNU6-1156P-201ENST00000410365 100 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 AC093578.1-201ENST00000415219 368 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 AL512844.2-201ENST00000433990 593 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 AC092573.2-201ENST00000434546 243 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.56□□□□□ -1.84
NDC1Q9BTX1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.56□□□□□ -1.84
NDC1Q9BTX1 RNU6-1037P-201ENST00000459571 107 ntBASIC3.56□□□□□ -1.84
NDC1Q9BTX1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms