Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 SNORA4.3-201ENST00000365564 137 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 Y_RNA.390-201ENST00000383932 102 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 RNA5SP354-201ENST00000391247 136 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 UBE2V1P2-201ENST00000397758 440 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AL122016.1-201ENST00000403365 367 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 RNU2-9P-201ENST00000410194 145 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC063976.3-201ENST00000426849 329 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC133104.1-201ENST00000429100 218 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC108938.1-201ENST00000451204 136 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 RPS3P1-201ENST00000456781 192 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC092798.1-201ENST00000458542 409 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 MRPL42P6-201ENST00000486397 371 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 FAM92A1P2-202ENST00000504766 877 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 Y_RNA.689-201ENST00000516589 107 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 RNU6-914P-201ENST00000516749 109 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 RNU6-703P-201ENST00000516946 107 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC009902.1-201ENST00000519351 183 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 SUB1P2-201ENST00000556401 297 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC027176.1-201ENST00000560204 514 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC024619.4-201ENST00000580924 316 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 MIR3682-201ENST00000581338 84 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC011471.1-201ENST00000585766 187 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC245014.2-201ENST00000603689 287 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC007938.3-201ENST00000604965 623 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC246785.4-201ENST00000605374 287 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AC007014.2-201ENST00000615581 479 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AL359880.1-201ENST00000621879 266 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AL512643.1-201ENST00000635735 524 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.16□□□□□ -2.06
EBF4Q9BQW3 AL137003.2-201ENST00000606924 2538 ntBASIC2.16□□□□□ -2.06
EBF4Q9BQW3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.15□□□□□ -2.06
EBF4Q9BQW3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
EBF4Q9BQW3 RNU1-105P-201ENST00000363470 161 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 SNORA75B-201ENST00000384053 137 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RNU6-1103P-201ENST00000384150 107 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RNU6-190P-201ENST00000384154 102 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RNU6-74P-201ENST00000384235 107 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RNU6-456P-201ENST00000384493 107 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RNU6-658P-201ENST00000384606 106 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RNU6-606P-201ENST00000384721 111 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 MIR558-201ENST00000384920 94 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 MIR128-1-201ENST00000384921 82 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AL590002.1-201ENST00000406554 418 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 BTF3P7-201ENST00000407097 488 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 EIF1P1-201ENST00000421436 341 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AL353729.1-201ENST00000425044 720 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC002486.1-201ENST00000435098 391 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RBMX2P4-201ENST00000441256 376 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RNU6-953P-201ENST00000459154 107 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RPL37P6-201ENST00000460682 294 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC107626.1-201ENST00000471084 183 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RPL31P41-201ENST00000477967 372 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC090255.1-201ENST00000495779 349 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC109927.2-201ENST00000506416 303 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RNA5SP148-201ENST00000516527 94 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RNU6-677P-201ENST00000516914 101 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC136619.2-201ENST00000563361 631 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC092325.1-201ENST00000566449 554 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 MIR4319-201ENST00000577285 85 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 BNIP3P9-201ENST00000603714 553 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 MIR15A-201ENST00000607334 83 ntBASIC2.15□□□□□ -2.07
EBF4Q9BQW3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.15□□□□□ -2.07
EBF4Q9BQW3 AC073346.2-201ENST00000624724 2058 ntBASIC2.14□□□□□ -2.07
EBF4Q9BQW3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
EBF4Q9BQW3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
EBF4Q9BQW3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms