Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 RPL26P27-201ENST00000414397 437 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 AC096649.2-201ENST00000416186 393 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 SKA2P1-201ENST00000425592 390 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.7□□□□□ -1.98
PKP2Q99959 AC098831.1-201ENST00000440661 216 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.7□□□□□ -1.98
PKP2Q99959 AC073415.1-201ENST00000449240 153 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 RN7SL863P-201ENST00000462370 296 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 GMFBP1-201ENST00000467831 427 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 AL163973.1-201ENST00000484753 577 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.7□□□□□ -1.98
PKP2Q99959 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.7□□□□□ -1.98
PKP2Q99959 AC098799.2-201ENST00000509466 868 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 TBCAP3-201ENST00000512475 312 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.7□□□□□ -1.98
PKP2Q99959 AC105417.1-201ENST00000514691 285 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 RPPH1-2P-201ENST00000516688 293 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 Y_RNA.702-201ENST00000516843 96 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 SNORA31.18-201ENST00000517043 134 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.7□□□□□ -1.98
PKP2Q99959 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.7□□□□□ -1.98
PKP2Q99959 AC024619.4-201ENST00000580924 316 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 AC090616.3-201ENST00000582184 217 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 AC006023.1-201ENST00000603944 259 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 RPL23AP88-201ENST00000605759 454 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 FRG1KP-201ENST00000623592 341 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PKP2Q99959 AC018692.3-201ENST00000623929 123 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 AC009033.1-201ENST00000624279 431 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 MIR3199-2-201ENST00000636243 86 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 U2.21-201ENST00000637295 81 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 MTND5P17-201ENST00000418405 1603 ntBASIC2.7□□□□□ -1.98
PKP2Q99959 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
PKP2Q99959 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PKP2Q99959 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PKP2Q99959 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.7□□□□□ -1.98
PKP2Q99959 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PKP2Q99959 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.69□□□□□ -1.98
PKP2Q99959 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PKP2Q99959 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
PKP2Q99959 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PKP2Q99959 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
PKP2Q99959 MIR22-201ENST00000362190 85 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 RNU6-778P-201ENST00000363269 103 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 SNORA25.6-201ENST00000364121 118 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 RNU6-461P-201ENST00000364195 107 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 SNORA62.1-201ENST00000364287 154 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 RNU6-512P-201ENST00000364438 103 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AL356776.1-201ENST00000406574 447 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AC114491.1-201ENST00000416095 246 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AC093106.2-201ENST00000428212 385 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.69□□□□□ -1.98
PKP2Q99959 RPL36AP53-201ENST00000432891 316 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.69□□□□□ -1.98
PKP2Q99959 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.69□□□□□ -1.98
PKP2Q99959 MTND4P25-201ENST00000441039 533 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 OSTCP8-201ENST00000445117 448 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.69□□□□□ -1.98
PKP2Q99959 RPS29P15-201ENST00000458329 171 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AC003982.1-202ENST00000469928 248 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AC117440.1-201ENST00000474107 571 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.69□□□□□ -1.98
PKP2Q99959 AC018710.1-201ENST00000506509 158 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.69□□□□□ -1.98
PKP2Q99959 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.69□□□□□ -1.98
PKP2Q99959 SCARNA17.1-201ENST00000516211 143 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 SCARNA17.2-201ENST00000516334 143 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 SNORA9.3-201ENST00000516383 129 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 SCARNA11.3-201ENST00000517276 130 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.69□□□□□ -1.98
PKP2Q99959 AC005730.3-201ENST00000583067 366 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 MIR3117-201ENST00000584034 78 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.69□□□□□ -1.98
PKP2Q99959 AL355598.1-201ENST00000604169 202 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AC008945.2-201ENST00000606056 604 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AC013412.1-201ENST00000610687 192 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 DISC2.1-201ENST00000612827 205 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 DUSP12P1-201ENST00000612874 516 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 AC025253.1-201ENST00000613623 543 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 SCARNA17.4-201ENST00000614296 143 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.69□□□□□ -1.98
PKP2Q99959 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.69□□□□□ -1.98
PKP2Q99959 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.69□□□□□ -1.98
PKP2Q99959 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.69□□□□□ -1.98
PKP2Q99959 AC009487.2-201ENST00000420969 6821 ntBASIC2.69□□□□□ -1.98
PKP2Q99959 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.69□□□□□ -1.98
PKP2Q99959 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PKP2Q99959 Y_RNA.70-201ENST00000362886 110 ntBASIC2.68□□□□□ -1.98
PKP2Q99959 RNU6-179P-201ENST00000363350 107 ntBASIC2.68□□□□□ -1.98
PKP2Q99959 Y_RNA.160-201ENST00000363677 92 ntBASIC2.68□□□□□ -1.98
PKP2Q99959 SMIM11P1-201ENST00000369586 178 ntBASIC2.68□□□□□ -1.98
PKP2Q99959 RNA5SP118-201ENST00000410385 109 ntBASIC2.68□□□□□ -1.98
PKP2Q99959 RPL21P111-201ENST00000418453 477 ntBASIC2.68□□□□□ -1.98
PKP2Q99959 MTCYBP8-201ENST00000422855 651 ntBASIC2.68□□□□□ -1.98
PKP2Q99959 RAC1P6-201ENST00000423911 575 ntBASIC2.68□□□□□ -1.98
PKP2Q99959 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.68□□□□□ -1.98
PKP2Q99959 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.68□□□□□ -1.98
PKP2Q99959 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.68□□□□□ -1.98
PKP2Q99959 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms