Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN18Q99952 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.02□□□□□ -1.77
PTPN18Q99952 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN18Q99952 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN18Q99952 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN18Q99952 Y_RNA.2-201ENST00000362330 96 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 Y_RNA.288-201ENST00000364854 92 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 RNU6-190P-201ENST00000384154 102 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 Y_RNA.480-201ENST00000384364 102 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 Y_RNA.485-201ENST00000384395 102 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 MIR514A1-201ENST00000385133 98 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 ARL5AP4-201ENST00000430731 512 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 AL353752.1-201ENST00000454946 260 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 RNU6-953P-201ENST00000459154 107 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 RPL21P104-201ENST00000464143 478 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 AC092436.3-201ENST00000511788 257 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 RNU6-120P-201ENST00000516077 103 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 RNU6-677P-201ENST00000516914 101 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN18Q99952 AC067852.3-201ENST00000589177 561 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.01□□□□□ -1.77
PTPN18Q99952 AC004805.2-201ENST00000605382 482 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 AC078938.1-201ENST00000620993 318 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 OTUD4P1-201ENST00000237841 3067 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 AC011266.1-201ENST00000624119 3569 ntBASIC4.01□□□□□ -1.77
PTPN18Q99952 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
PTPN18Q99952 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PTPN18Q99952 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN18Q99952 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTPN18Q99952 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTPN18Q99952 USP8P1-201ENST00000494673 3183 ntBASIC4□□□□□ -1.77
PTPN18Q99952 Z83843.1-201ENST00000604070 3685 ntBASIC4□□□□□ -1.77
PTPN18Q99952 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTPN18Q99952 AC068254.2-201ENST00000623938 3577 ntBASIC4□□□□□ -1.77
PTPN18Q99952 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN18Q99952 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN18Q99952 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN18Q99952 RNU6-288P-201ENST00000363690 104 ntBASIC4□□□□□ -1.77
PTPN18Q99952 RNU6-450P-201ENST00000364654 107 ntBASIC4□□□□□ -1.77
PTPN18Q99952 Y_RNA.512-201ENST00000384518 102 ntBASIC4□□□□□ -1.77
PTPN18Q99952 RNU6-14P-201ENST00000384630 106 ntBASIC4□□□□□ -1.77
PTPN18Q99952 RNU4-61P-201ENST00000411243 107 ntBASIC4□□□□□ -1.77
PTPN18Q99952 RNA5SP111-201ENST00000411386 101 ntBASIC4□□□□□ -1.77
PTPN18Q99952 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4□□□□□ -1.77
PTPN18Q99952 RPL27AP8-201ENST00000424277 446 ntBASIC4□□□□□ -1.77
PTPN18Q99952 AL590383.1-201ENST00000428602 75 ntBASIC4□□□□□ -1.77
PTPN18Q99952 AL158071.1-201ENST00000430315 461 ntBASIC4□□□□□ -1.77
PTPN18Q99952 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4□□□□□ -1.77
PTPN18Q99952 RPS15AP10-201ENST00000432472 382 ntBASIC4□□□□□ -1.77
PTPN18Q99952 CREM-226ENST00000469949 721 ntTSL 3 BASIC4□□□□□ -1.77
PTPN18Q99952 AC006445.1-201ENST00000491925 405 ntBASIC4□□□□□ -1.77
PTPN18Q99952 AC097462.2-201ENST00000504623 481 ntBASIC4□□□□□ -1.77
PTPN18Q99952 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4□□□□□ -1.77
PTPN18Q99952 Y_RNA.689-201ENST00000516589 107 ntBASIC4□□□□□ -1.77
PTPN18Q99952 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4□□□□□ -1.77
PTPN18Q99952 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4□□□□□ -1.77
PTPN18Q99952 MIR4672-201ENST00000583126 81 ntBASIC4□□□□□ -1.77
PTPN18Q99952 MIR4276-201ENST00000584832 70 ntBASIC4□□□□□ -1.77
PTPN18Q99952 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4□□□□□ -1.77
PTPN18Q99952 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4□□□□□ -1.77
PTPN18Q99952 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4□□□□□ -1.77
PTPN18Q99952 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN18Q99952 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4□□□□□ -1.77
PTPN18Q99952 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4□□□□□ -1.77
PTPN18Q99952 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4□□□□□ -1.77
PTPN18Q99952 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PTPN18Q99952 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN18Q99952 AC004944.1-201ENST00000517807 3059 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 AL035425.3-201ENST00000564206 4996 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PTPN18Q99952 RNU6-371P-201ENST00000364283 108 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 Y_RNA.350-201ENST00000365409 98 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 SNORD14.1-201ENST00000365609 90 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 Y_RNA.518-201ENST00000384552 113 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 RNU6-306P-201ENST00000384617 107 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 AC063979.1-201ENST00000415539 377 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 MRPS18CP6-201ENST00000423587 223 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 RPS6P12-201ENST00000432491 726 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.99□□□□□ -1.77
PTPN18Q99952 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.99□□□□□ -1.77
PTPN18Q99952 DYNLT3P2-201ENST00000442517 295 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 SNORD127-201ENST00000458892 86 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 RNU6-1132P-201ENST00000459214 107 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 RNU7-138P-201ENST00000459479 64 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 AC022447.4-201ENST00000504053 364 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.99□□□□□ -1.77
PTPN18Q99952 RN7SKP60-201ENST00000516985 239 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 Y_RNA.715-201ENST00000517082 110 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 RN7SKP258-201ENST00000517151 304 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.99□□□□□ -1.77
PTPN18Q99952 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.99□□□□□ -1.77
PTPN18Q99952 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.99□□□□□ -1.77
PTPN18Q99952 AC125232.2-201ENST00000592457 143 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 AC007619.2-201ENST00000605743 379 ntBASIC3.99□□□□□ -1.77
PTPN18Q99952 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PTPN18Q99952 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.99□□□□□ -1.77
PTPN18Q99952 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN18Q99952 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN18Q99952 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms