Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL670379.5-201ENST00000605253 252 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AL670379.8-201ENST00000605353 252 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AL670379.7-201ENST00000605823 252 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-85P-201ENST00000605989 107 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 U7.8-201ENST00000619968 63 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 MIR6075-201ENST00000620782 95 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AC091903.1-201ENST00000624322 454 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AC048347.1-201ENST00000624621 427 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AL691447.3-201ENST00000635020 330 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AL034408.1-202ENST00000636088 415 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-989P-201ENST00000362756 107 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-1159P-201ENST00000362933 107 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 RNY1P16-201ENST00000363063 111 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.237-201ENST00000364439 102 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.270-201ENST00000364693 104 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-746P-201ENST00000384112 109 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-886P-201ENST00000384319 105 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 SNORD51-201ENST00000384320 80 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-754P-201ENST00000391166 107 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 MIR548I2-201ENST00000408348 149 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 AL645568.3-201ENST00000433683 316 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 AL162389.1-201ENST00000449233 177 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 PCMTD1P1-201ENST00000455560 355 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 SNRPGP3-201ENST00000469405 227 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 HMGN2P13-201ENST00000476476 274 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 AC005798.1-201ENST00000513715 387 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-390P-201ENST00000516259 103 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 AC007991.1-201ENST00000522680 631 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 AC067852.3-201ENST00000589177 561 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 MIR3976-201ENST00000606807 139 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 MIR7851-201ENST00000610611 160 ntBASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.84□□□□□ -1.79
CDK5RAP1Q96SZ6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDK5RAP1Q96SZ6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.8
CDK5RAP1Q96SZ6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 SAGE4P-201ENST00000442271 3381 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 USP8P1-201ENST00000494673 3183 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.54-201ENST00000362766 105 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.84-201ENST00000363011 104 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.471-201ENST00000384312 102 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU6-790P-201ENST00000384479 105 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU2-25P-201ENST00000411041 191 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 AL160275.3-201ENST00000423876 471 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 CKS1BP5-201ENST00000434172 273 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 RPL35AP22-201ENST00000436855 335 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 NEFMP1-201ENST00000443423 1006 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 BX276092.4-201ENST00000452056 248 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 RPL31P13-201ENST00000484151 370 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 MTND3P25-201ENST00000509243 135 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.687-201ENST00000516558 91 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 AC100870.1-201ENST00000522035 505 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 ERHP1-201ENST00000523006 310 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 AC006329.2-201ENST00000611491 394 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 AL391261.4-201ENST00000616012 481 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 AL450472.1-202ENST00000637286 180 ntBASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP1Q96SZ6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AL353746.1-201ENST00000566293 6881 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AP001148.1-201ENST00000624124 2359 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 RNA5SP51-201ENST00000364750 119 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU6-125P-201ENST00000384505 107 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 Y_RNA.533-201ENST00000384596 114 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 AL603910.2-201ENST00000407268 136 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 RPL21P90-201ENST00000415692 466 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 UBE2V1P4-201ENST00000425374 344 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 GOT2P5-201ENST00000433995 546 ntBASIC3.82□□□□□ -1.8
CDK5RAP1Q96SZ6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms