Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL121978.1-201ENST00000402778 359 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 AC009310.1-201ENST00000414414 451 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.82□□□□□ -2.28
IFT140Q96RY7 AC245047.4-201ENST00000433189 144 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 AC098831.1-201ENST00000440661 216 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 AC093677.1-201ENST00000514414 678 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 RNU6-889P-201ENST00000517189 103 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 OR5B19P-201ENST00000531766 928 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 AL359212.1-201ENST00000556608 614 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 AC009268.1-201ENST00000561352 1203 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 LINC00557-201ENST00000563184 1279 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 AC242628.1-201ENST00000606810 391 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 AC083865.1-201ENST00000636634 831 ntBASIC0.82□□□□□ -2.28
IFT140Q96RY7 AL109755.1-201ENST00000401791 649 ntBASIC0.81□□□□□ -2.28
IFT140Q96RY7 RPL31P54-201ENST00000429803 370 ntBASIC0.81□□□□□ -2.28
IFT140Q96RY7 AL354941.1-201ENST00000438600 464 ntBASIC0.81□□□□□ -2.28
IFT140Q96RY7 COX7A2P2-201ENST00000505291 250 ntBASIC0.81□□□□□ -2.28
IFT140Q96RY7 SMURF2P1-201ENST00000514992 481 ntBASIC0.81□□□□□ -2.28
IFT140Q96RY7 MIR4422-201ENST00000581938 83 ntBASIC0.81□□□□□ -2.28
IFT140Q96RY7 AC068787.1-201ENST00000623908 691 ntBASIC0.81□□□□□ -2.28
IFT140Q96RY7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
IFT140Q96RY7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
IFT140Q96RY7 SNORA63.3-201ENST00000362682 132 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
IFT140Q96RY7 UBE2V1P4-201ENST00000425374 344 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 CR769776.1-201ENST00000441254 787 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 MTCO1P53-201ENST00000441633 699 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.8□□□□□ -2.28
IFT140Q96RY7 RPL22P13-201ENST00000493291 347 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.8□□□□□ -2.28
IFT140Q96RY7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
IFT140Q96RY7 NACAP3-201ENST00000552100 481 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 AC019288.1-201ENST00000557918 224 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 VN1R88P-201ENST00000596787 292 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 AP000654.2-201ENST00000605633 586 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.8□□□□□ -2.28
IFT140Q96RY7 U1.36-201ENST00000620684 176 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.8□□□□□ -2.28
IFT140Q96RY7 SNORD115-3-201ENST00000363100 82 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 MIR518D-201ENST00000385014 87 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 USP9YP24-201ENST00000434374 697 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.8□□□□□ -2.28
IFT140Q96RY7 MTCO1P31-201ENST00000506355 492 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.8□□□□□ -2.28
IFT140Q96RY7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
IFT140Q96RY7 CYB5AP5-201ENST00000549779 389 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 DUXAP1-201ENST00000556632 463 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 AC004067.1-201ENST00000608733 700 ntBASIC0.8□□□□□ -2.28
IFT140Q96RY7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.8□□□□□ -2.28
IFT140Q96RY7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
IFT140Q96RY7 MTCO1P23-201ENST00000415223 1526 ntBASIC0.79□□□□□ -2.28
IFT140Q96RY7 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
IFT140Q96RY7 Y_RNA.471-201ENST00000384312 102 ntBASIC0.79□□□□□ -2.28
IFT140Q96RY7 MIR92A1-201ENST00000385233 78 ntBASIC0.79□□□□□ -2.28
IFT140Q96RY7 PSMA6P3-201ENST00000428242 164 ntBASIC0.79□□□□□ -2.28
IFT140Q96RY7 AL591043.1-201ENST00000432461 424 ntBASIC0.79□□□□□ -2.28
IFT140Q96RY7 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
IFT140Q96RY7 RNA5SP285-201ENST00000516619 119 ntBASIC0.79□□□□□ -2.28
IFT140Q96RY7 AC004817.2-201ENST00000561794 651 ntBASIC0.79□□□□□ -2.28
IFT140Q96RY7 RNU6-878P-201ENST00000384578 110 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 MIR525-201ENST00000384978 85 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 RNU11-3P-201ENST00000391111 133 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 MIR1283-2-201ENST00000408621 87 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 C1DP1-201ENST00000426049 402 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 PRPS1P1-201ENST00000445305 876 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 RNU6-775P-201ENST00000459318 96 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 AC109927.2-201ENST00000506416 303 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.78□□□□□ -2.28
IFT140Q96RY7 SNORA25.11-201ENST00000515935 105 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 SNORD19.2-201ENST00000516978 73 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.78□□□□□ -2.28
IFT140Q96RY7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.78□□□□□ -2.28
IFT140Q96RY7 AL132857.1-201ENST00000555180 708 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 MIR3167-201ENST00000579623 85 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 SNRPGP17-201ENST00000603780 214 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.78□□□□□ -2.28
IFT140Q96RY7 MTND1P37-201ENST00000636562 264 ntBASIC0.78□□□□□ -2.28
IFT140Q96RY7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.77□□□□□ -2.29
IFT140Q96RY7 Z75746.1-201ENST00000440243 2080 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 RNU4-67P-201ENST00000364569 141 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 USP9YP19-201ENST00000412165 485 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 NDUFS5P4-201ENST00000412983 318 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 AC019070.1-201ENST00000415008 1024 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 USP9YP13-201ENST00000417797 480 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 AC114737.2-201ENST00000421583 173 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 ARPC3P5-201ENST00000448802 534 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.77□□□□□ -2.29
IFT140Q96RY7 AC244505.3-201ENST00000454598 187 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 FCF1P6-201ENST00000456841 595 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 AP001324.2-201ENST00000461163 319 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 AC018868.1-201ENST00000491307 315 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.77□□□□□ -2.29
IFT140Q96RY7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.77□□□□□ -2.29
IFT140Q96RY7 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
IFT140Q96RY7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.77□□□□□ -2.29
IFT140Q96RY7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.77□□□□□ -2.29
IFT140Q96RY7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
IFT140Q96RY7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms