Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 AL159987.2-201ENST00000432754 307 ntBASIC2.89□□□□□ -1.95
NR1H4Q96RI1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 MED28P2-201ENST00000475771 317 ntBASIC2.89□□□□□ -1.95
NR1H4Q96RI1 AIG1P1-201ENST00000503376 148 ntBASIC2.89□□□□□ -1.95
NR1H4Q96RI1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.89□□□□□ -1.95
NR1H4Q96RI1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 AC090115.3-201ENST00000553218 849 ntBASIC2.89□□□□□ -1.95
NR1H4Q96RI1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 MIR3160-1-201ENST00000577972 85 ntBASIC2.89□□□□□ -1.95
NR1H4Q96RI1 AC138761.3-201ENST00000579993 334 ntBASIC2.89□□□□□ -1.95
NR1H4Q96RI1 AL121772.2-201ENST00000614331 297 ntBASIC2.89□□□□□ -1.95
NR1H4Q96RI1 Z69720.2-201ENST00000624755 279 ntBASIC2.89□□□□□ -1.95
NR1H4Q96RI1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.89□□□□□ -1.95
NR1H4Q96RI1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 RPL9P7-201ENST00000330965 580 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 RNA5SP479-201ENST00000364858 117 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 SNORD116-20-201ENST00000384529 92 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 MIR1193-201ENST00000408109 78 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 CYCSP19-201ENST00000411715 316 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AP000705.1-201ENST00000454567 350 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 RNU6-1208P-201ENST00000459588 107 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 RN7SL20P-201ENST00000488827 297 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 TBCAP3-201ENST00000512475 312 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 SNORA31.15-201ENST00000516771 132 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 SNORA25.17-201ENST00000517184 124 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 MTND4LP26-201ENST00000518144 282 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 COX6CP5-201ENST00000527162 228 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AC078814.3-201ENST00000553036 491 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 RNU6-89P-201ENST00000606519 100 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AC092807.2-201ENST00000609367 243 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AL157817.1-201ENST00000614264 790 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AC103705.1-201ENST00000619013 241 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AC010378.1-201ENST00000619270 362 ntBASIC2.88□□□□□ -1.95
NR1H4Q96RI1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.88□□□□□ -1.95
NR1H4Q96RI1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.87□□□□□ -1.95
NR1H4Q96RI1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.87□□□□□ -1.95
NR1H4Q96RI1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NR1H4Q96RI1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-37P-201ENST00000362692 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-11P-201ENST00000364234 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 SNORD56.5-201ENST00000364281 72 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 SNORA68.1-201ENST00000364537 132 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-7-201ENST00000364784 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-534P-201ENST00000364877 106 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-8-201ENST00000365467 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-25P-201ENST00000383873 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-1-201ENST00000383898 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-48P-201ENST00000384161 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-36P-201ENST00000384172 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-4P-201ENST00000384205 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-5P-201ENST00000384238 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-3P-201ENST00000384314 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-16P-201ENST00000384385 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-15P-201ENST00000384534 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-2-201ENST00000384627 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-29P-201ENST00000384637 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-9-201ENST00000384776 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU6-33P-201ENST00000384793 107 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNA5SP118-201ENST00000410385 109 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.87□□□□□ -1.95
NR1H4Q96RI1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.87□□□□□ -1.95
NR1H4Q96RI1 Z96811.1-201ENST00000445880 108 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.87□□□□□ -1.95
NR1H4Q96RI1 AC090525.1-201ENST00000479116 478 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RPL22P13-201ENST00000493291 347 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.87□□□□□ -1.95
NR1H4Q96RI1 SNORA14.1-201ENST00000516113 141 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU1-95P-201ENST00000516357 160 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 SNORA43.2-201ENST00000516652 128 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 RNU1-128P-201ENST00000516704 160 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 AC109479.2-201ENST00000517842 174 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 AC023050.3-201ENST00000541142 333 ntBASIC2.87□□□□□ -1.95
NR1H4Q96RI1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.87□□□□□ -1.95
NR1H4Q96RI1 CR383656.8-201ENST00000549046 145 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms