Protein–RNA interactions for Protein: Q96Q05

TRAPPC9, Trafficking protein particle complex subunit 9, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9Q96Q05 AL627309.6-201ENST00000606857 840 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 AC121333.1-201ENST00000567488 2709 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 CDC27P3-201ENST00000635418 1910 ntBASIC3.21□□□□□ -1.9
TRAPPC9Q96Q05 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 RNU6-266P-201ENST00000364225 107 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 FGF7P8-201ENST00000402994 292 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AC245054.2-201ENST00000415639 319 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AC016831.2-201ENST00000417179 352 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 RPL7P10-201ENST00000417407 739 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AL590639.1-201ENST00000456484 337 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 RPS27P26-201ENST00000494583 239 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AC006199.1-201ENST00000548728 219 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 AC010653.1-201ENST00000571108 881 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 MIR8057-201ENST00000620957 69 ntBASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.2□□□□□ -1.9
TRAPPC9Q96Q05 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 AC103988.1-201ENST00000566382 2177 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 RNU1-70P-201ENST00000362618 164 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 RNA5SP139-201ENST00000364340 117 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 Y_RNA.373-201ENST00000365600 103 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 RNU6-1027P-201ENST00000383998 107 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 RNU6-72P-201ENST00000384285 79 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 EIF4E2P1-201ENST00000393781 255 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 RAP1BP3-201ENST00000407180 549 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 U3.37-201ENST00000408528 213 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 RNU2-49P-201ENST00000410666 184 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 AL139413.1-201ENST00000421309 217 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 TOMM20P4-201ENST00000427861 435 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 snoU109.2-201ENST00000459316 135 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 AC083904.1-201ENST00000487828 231 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 TBCAP3-201ENST00000512475 312 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 RNA5SP76-201ENST00000516277 87 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 RPL7P20-201ENST00000520308 745 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 AC012493.2-201ENST00000595083 291 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 BNIP3P25-201ENST00000596023 559 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 MIR7112-201ENST00000616126 65 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 AC090617.10-201ENST00000624308 134 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 SCARNA15.3-201ENST00000626315 122 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 SCARNA4.1-201ENST00000628597 123 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 AC110079.1-202ENST00000635213 138 ntBASIC3.19□□□□□ -1.9
TRAPPC9Q96Q05 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 CASC19-280ENST00000642102 1351 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 Y_RNA.100-201ENST00000363141 102 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 MIR767-201ENST00000390228 109 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 RNU6-750P-201ENST00000390946 107 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 RNA5SP354-201ENST00000391247 136 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 RPL39P40-201ENST00000445481 146 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 Z75741.1-201ENST00000446793 314 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 AL671855.1-201ENST00000446875 1203 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 NIPA2P5-201ENST00000452282 464 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 AC007547.1-201ENST00000462177 490 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 AC087884.1-201ENST00000469738 328 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 AC110794.1-201ENST00000505816 425 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 AC113155.1-201ENST00000511141 769 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 AC069113.1-201ENST00000517763 267 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 AC023050.3-201ENST00000541142 333 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 AL121821.2-201ENST00000556081 394 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 MTCO3P13-201ENST00000577757 781 ntBASIC3.18□□□□□ -1.9
TRAPPC9Q96Q05 BNIP3P10-201ENST00000605360 577 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms