Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 CYCSP39-201ENST00000565821 309 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 U6.92-201ENST00000636464 89 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 FTLP6-201ENST00000355274 422 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 Y_RNA.84-201ENST00000363011 104 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 RNU6-209P-201ENST00000384118 107 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 AC096920.1-201ENST00000423991 241 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 SDAD1P3-201ENST00000427380 333 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 AC091286.1-201ENST00000431233 461 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 AL513124.1-201ENST00000450410 614 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 AC146944.2-203ENST00000502493 354 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 UBE2CP3-201ENST00000502715 450 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 AC139495.1-202ENST00000513164 354 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 Y_RNA.713-201ENST00000517013 96 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 MIR2355-201ENST00000517199 87 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 AC022655.2-201ENST00000577280 318 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 AP001148.1-201ENST00000624124 2359 ntBASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.92□□□□□ -1.78
PTCHD1Q96NR3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 RNU6-600P-201ENST00000362524 99 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 RNU6-527P-201ENST00000363425 104 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 Z98749.2-208ENST00000381646 500 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 Y_RNA.439-201ENST00000384119 94 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 RNY3P4-201ENST00000384428 101 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AL512844.2-201ENST00000433990 593 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 NUTF2P7-201ENST00000453086 375 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AL132838.2-201ENST00000492041 314 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 RPL23AP49-201ENST00000492925 468 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 RPL30P5-201ENST00000494923 336 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 ANXA2P1-201ENST00000505539 926 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 SNORA43.2-201ENST00000516652 128 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 RNU6-111P-201ENST00000517179 105 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 IGKV2-23-201ENST00000518729 323 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 CASP1P1-201ENST00000526345 212 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AP002770.2-201ENST00000543613 532 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AC093023.1-201ENST00000547375 507 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 SYF2P1-201ENST00000550658 413 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 CYP4A43P-201ENST00000568156 121 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 RN7SL600P-201ENST00000581811 299 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AL591034.3-201ENST00000605511 685 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AP001282.2-201ENST00000616149 309 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AC112484.5-201ENST00000624189 228 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 MIR492-201ENST00000638676 116 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 AC009541.1-201ENST00000438279 2662 ntBASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTCHD1Q96NR3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PTCHD1Q96NR3 AP001486.2-201ENST00000561652 5113 ntBASIC3.9□□□□□ -1.78
PTCHD1Q96NR3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PTCHD1Q96NR3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PTCHD1Q96NR3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PTCHD1Q96NR3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 Y_RNA.20-201ENST00000362479 113 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 RNU4-9P-201ENST00000364951 139 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 Y_RNA.416-201ENST00000384014 113 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 RNU6-658P-201ENST00000384606 106 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 MIR215-201ENST00000384858 110 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 MIR548H3-201ENST00000408771 118 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 RPL21P40-201ENST00000428586 483 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 Z82188.1-201ENST00000436709 154 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AL356535.1-201ENST00000440335 398 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AL353748.1-201ENST00000440753 474 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms