Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF48Q96MX3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
ZNF48Q96MX3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 MTND5P27-201ENST00000428871 1720 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 SNORA63.1-201ENST00000362493 131 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 Y_RNA.288-201ENST00000364854 92 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 RNU2-64P-201ENST00000411315 191 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AC091286.1-201ENST00000431233 461 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 MTND2P29-201ENST00000438595 412 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 CHEK2P4-201ENST00000450340 246 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AC008571.1-201ENST00000467232 300 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AC105758.1-201ENST00000506038 399 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 RNU1-95P-201ENST00000516357 160 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 RNU1-128P-201ENST00000516704 160 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 SCARNA14-201ENST00000516903 136 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 Y_RNA.715-201ENST00000517082 110 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AC125232.2-201ENST00000592457 143 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AC016727.2-201ENST00000603988 621 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AL450472.3-201ENST00000615578 367 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AC138627.2-201ENST00000624202 601 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 MIR4272-201ENST00000635924 64 ntBASIC3.17□□□□□ -1.9
ZNF48Q96MX3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF48Q96MX3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC233263.6-201ENST00000631132 1963 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC010733.2-201ENST00000589496 5702 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 RNA5SP119-201ENST00000362715 117 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 Y_RNA.151-201ENST00000363566 112 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 RNU6-371P-201ENST00000364283 108 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 RNA5SP97-201ENST00000365006 84 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 Y_RNA.314-201ENST00000365114 102 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 SNORD14.1-201ENST00000365609 90 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 RNU6-209P-201ENST00000384118 107 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 Y_RNA.461-201ENST00000384263 103 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 RNU6-713P-201ENST00000384761 107 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 SNORA3.3-201ENST00000408712 125 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 RNU4-61P-201ENST00000411243 107 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 SYF2P2-201ENST00000417620 583 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 PGBD4P6-201ENST00000421501 610 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 HMGB1P9-201ENST00000429856 646 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC087650.1-201ENST00000431445 468 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC090774.1-201ENST00000435925 246 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AL356535.1-201ENST00000440335 398 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC073910.1-201ENST00000445047 438 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 RPL31P60-201ENST00000478450 367 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC026403.1-201ENST00000518938 295 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC087369.1-201ENST00000520775 996 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC007991.1-201ENST00000522680 631 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 MIR3944-201ENST00000581277 108 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC004805.2-201ENST00000605382 482 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC005344.1-201ENST00000613391 459 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC009093.8-201ENST00000641769 292 ntBASIC3.16□□□□□ -1.9
ZNF48Q96MX3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF48Q96MX3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.9
ZNF48Q96MX3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.15□□□□□ -1.9
ZNF48Q96MX3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ZNF48Q96MX3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.15□□□□□ -1.9
ZNF48Q96MX3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ZNF48Q96MX3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 Y_RNA.350-201ENST00000365409 98 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 SNORA5A-201ENST00000384111 134 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 MT-TW-201ENST00000387382 68 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 RNU6-817P-201ENST00000391083 104 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 SNORA11.1-201ENST00000408133 129 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 SSXP9-201ENST00000417503 292 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 BX276092.3-201ENST00000424182 230 ntBASIC3.15□□□□□ -1.91
ZNF48Q96MX3 AL133396.1-201ENST00000432048 687 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms