Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 SNORD21-201ENST00000383953 95 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 Y_RNA.530-201ENST00000384587 101 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 SNORD17-201ENST00000390930 237 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 AL512633.1-201ENST00000399931 655 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 Z99755.1-201ENST00000414048 380 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 ATG3P1-201ENST00000419507 911 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC138Q96M89 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC138Q96M89 FTH1P25-201ENST00000447665 469 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC138Q96M89 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 RPS26P21-201ENST00000475397 348 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 RPL23AP45-201ENST00000476406 468 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 RN7SL293P-201ENST00000481765 281 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC138Q96M89 FCF1P8-201ENST00000510322 597 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 AC109479.2-201ENST00000517842 174 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 AC090136.1-201ENST00000520009 240 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 AC009163.5-201ENST00000575421 637 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 MIR4801-201ENST00000582704 82 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 MIR5692C1-201ENST00000585309 91 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 AL670379.10-201ENST00000604330 253 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 BNIP3P10-201ENST00000605360 577 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 AL670379.9-201ENST00000605428 253 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 AC123912.5-201ENST00000605470 343 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 AC019176.2-201ENST00000611579 315 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 AC090617.10-201ENST00000624308 134 ntBASIC3.32□□□□□ -1.88
CCDC138Q96M89 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC138Q96M89 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC138Q96M89 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC138Q96M89 MTND5P1-201ENST00000445440 1375 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC138Q96M89 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC138Q96M89 RNA5SP119-201ENST00000362715 117 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 RNU6-78P-201ENST00000362897 107 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC138Q96M89 MIR449B-201ENST00000384995 97 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 AL162578.1-201ENST00000406202 378 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 SNORD56-201ENST00000413522 71 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 AL139413.1-201ENST00000421309 217 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC138Q96M89 NDUFA5P4-201ENST00000436704 385 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC138Q96M89 AC012308.1-201ENST00000451232 178 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 MED28P2-201ENST00000475771 317 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 AC021205.2-201ENST00000480069 347 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC138Q96M89 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC138Q96M89 PRDX4P1-201ENST00000507189 574 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 AC098799.2-201ENST00000509466 868 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 FAM206BP-201ENST00000510179 541 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC138Q96M89 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC138Q96M89 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC138Q96M89 RNU5F-8P-201ENST00000515941 111 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 IGKV2-26-201ENST00000518305 343 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 RNU6-323P-201ENST00000521915 107 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 PSMA3P-201ENST00000555485 635 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 MIR4506-201ENST00000584693 77 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC138Q96M89 AC010620.2-201ENST00000600135 313 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 U3.45-201ENST00000607547 219 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
CCDC138Q96M89 AL356274.2-201ENST00000624379 3752 ntBASIC3.31□□□□□ -1.88
CCDC138Q96M89 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC138Q96M89 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC138Q96M89 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC138Q96M89 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC138Q96M89 Y_RNA.86-201ENST00000363020 111 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 SNORD113-7-201ENST00000363762 77 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 U3.26-201ENST00000391236 204 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC138Q96M89 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC138Q96M89 RPL30P16-201ENST00000419341 429 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 RPL7P37-201ENST00000425095 738 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 AC093151.1-201ENST00000427711 313 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 MTCO3P18-201ENST00000440206 761 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 CENPBD1P1-201ENST00000464061 469 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 RPL27AP5-201ENST00000469428 449 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 RNA5SP385-201ENST00000515947 110 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 RNU6-377P-201ENST00000515965 102 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 RN7SKP282-201ENST00000516824 299 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC138Q96M89 GLYCAM1-201ENST00000546596 285 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC138Q96M89 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC138Q96M89 AC018638.8-201ENST00000588755 281 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC138Q96M89 uc_338.14-201ENST00000613162 166 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CCDC138Q96M89 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC138Q96M89 MIR3529-201ENST00000637713 78 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 U4.7-201ENST00000638126 106 ntBASIC3.3□□□□□ -1.88
CCDC138Q96M89 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC138Q96M89 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CCDC138Q96M89 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC138Q96M89 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC138Q96M89 AC138393.1-203ENST00000327086 343 ntBASIC3.29□□□□□ -1.88
CCDC138Q96M89 SNORD116-20-201ENST00000384529 92 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms